Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1905

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,978,550	-	hlyD	Synpcc7942_1904	0.32	+1.8
1,978,572	-	hlyD	Synpcc7942_1904	0.33	+0.8
1,978,661	-	hlyD	Synpcc7942_1904	0.40	+0.8
1,978,738	+	hlyD	Synpcc7942_1904	0.46	+2.2
1,978,747	-	hlyD	Synpcc7942_1904	0.47	-1.3
1,978,792	-	hlyD	Synpcc7942_1904	0.50	+1.7
1,978,807	+	hlyD	Synpcc7942_1904	0.51	+1.5
1,978,832	+	hlyD	Synpcc7942_1904	0.53	+0.4
1,978,842	-	hlyD	Synpcc7942_1904	0.54	+0.1
1,978,938	+	hlyD	Synpcc7942_1904	0.61	+1.6
1,979,010	-	hlyD	Synpcc7942_1904	0.66	+3.6
1,979,096	+	hlyD	Synpcc7942_1904	0.73	-1.1
1,979,298	-	hlyD	Synpcc7942_1904	0.88	+2.2
1,979,300	-	hlyD	Synpcc7942_1904	0.88	+0.4
1,979,317	+	hlyD	Synpcc7942_1904	0.90	-1.1
1,979,487	-				-0.1
1,979,487	-				-0.3
1,979,487	-				+1.5
1,979,487	-				-0.5
1,979,494	+				+1.0
1,979,571	-				+1.9
1,979,595	-				+1.0
1,979,626	+				+0.9
1,979,626	+				+0.4
1,979,626	+				-0.5
1,979,626	+				+0.3
1,979,626	+				+0.6
1,979,634	-				-1.1
1,979,634	-				-0.1
1,979,634	-				+2.6
1,979,656	+				-0.2
1,979,669	-				+1.2
1,979,686	+				+0.3
1,979,762	+				+0.3
1,979,767	+				+0.3
1,979,767	+				+0.4
1,979,767	+				+0.4
1,979,775	-				+0.3
1,979,812	+	hlyB	Synpcc7942_1905	0.11	+1.6
1,979,833	+	hlyB	Synpcc7942_1905	0.11	-0.1
1,979,833	+	hlyB	Synpcc7942_1905	0.11	-1.1
1,979,841	-	hlyB	Synpcc7942_1905	0.11	+1.7
1,979,843	-	hlyB	Synpcc7942_1905	0.12	+0.8
1,979,970	+				-0.1
1,979,970	+	hlyB	Synpcc7942_1905	0.16	-2.4
1,980,101	+	hlyB	Synpcc7942_1905	0.20	+2.2
1,980,101	+	hlyB	Synpcc7942_1905	0.20	-0.6
1,980,101	+	hlyB	Synpcc7942_1905	0.20	-2.1
1,980,109	-	hlyB	Synpcc7942_1905	0.20	-2.7
1,980,109	-	hlyB	Synpcc7942_1905	0.20	+0.9
1,980,109	-	hlyB	Synpcc7942_1905	0.20	+0.5
1,980,111	+	hlyB	Synpcc7942_1905	0.20	+1.2
1,980,114	+	hlyB	Synpcc7942_1905	0.21	-0.1
1,980,350	-	hlyB	Synpcc7942_1905	0.28	-1.9
1,980,368	+	hlyB	Synpcc7942_1905	0.29	+0.5
1,980,402	+	hlyB	Synpcc7942_1905	0.30	+1.9
1,980,449	+	hlyB	Synpcc7942_1905	0.32	-1.5
1,980,558	-	hlyB	Synpcc7942_1905	0.35	+0.5
1,980,642	-	hlyB	Synpcc7942_1905	0.38	+2.1
1,980,644	+	hlyB	Synpcc7942_1905	0.38	-0.1
1,980,689	+	hlyB	Synpcc7942_1905	0.40	+3.8
1,980,749	+	hlyB	Synpcc7942_1905	0.42	+0.4
1,980,751	+	hlyB	Synpcc7942_1905	0.42	+1.6
1,980,763	+	hlyB	Synpcc7942_1905	0.42	+3.6
1,980,793	+	hlyB	Synpcc7942_1905	0.43	-0.3
1,980,819	+	hlyB	Synpcc7942_1905	0.44	-2.2
1,980,863	+	hlyB	Synpcc7942_1905	0.46	+0.5
1,980,884	+	hlyB	Synpcc7942_1905	0.46	+3.1
1,980,893	-	hlyB	Synpcc7942_1905	0.47	-1.1
1,980,893	-	hlyB	Synpcc7942_1905	0.47	+1.2
1,980,904	+	hlyB	Synpcc7942_1905	0.47	-0.1
1,980,907	-				+2.7
1,980,907	-	hlyB	Synpcc7942_1905	0.47	+0.4
1,980,954	+	hlyB	Synpcc7942_1905	0.49	-0.6
1,981,003	+	hlyB	Synpcc7942_1905	0.50	-0.2
1,981,134	-	hlyB	Synpcc7942_1905	0.55	+0.5
1,981,222	-	hlyB	Synpcc7942_1905	0.57	+1.4
1,981,226	+	hlyB	Synpcc7942_1905	0.58	+1.6
1,981,318	-	hlyB	Synpcc7942_1905	0.61	+1.3
1,981,357	+	hlyB	Synpcc7942_1905	0.62	+1.9
1,981,365	+	hlyB	Synpcc7942_1905	0.62	+4.4
1,981,372	+	hlyB	Synpcc7942_1905	0.62	+0.4
1,981,402	+	hlyB	Synpcc7942_1905	0.63	+2.9
1,981,402	+	hlyB	Synpcc7942_1905	0.63	+0.7
1,981,410	-	hlyB	Synpcc7942_1905	0.64	-0.1
1,981,426	+	hlyB	Synpcc7942_1905	0.64	+0.8
1,981,582	+	hlyB	Synpcc7942_1905	0.69	+0.4
1,981,601	-	hlyB	Synpcc7942_1905	0.70	+3.6
1,981,601	-	hlyB	Synpcc7942_1905	0.70	+1.0
1,981,668	-	hlyB	Synpcc7942_1905	0.72	-0.3
1,981,693	+	hlyB	Synpcc7942_1905	0.73	-0.1
1,981,699	-	hlyB	Synpcc7942_1905	0.73	+1.1
1,981,707	-	hlyB	Synpcc7942_1905	0.74	+0.6
1,981,718	+	hlyB	Synpcc7942_1905	0.74	+2.5
1,981,742	-	hlyB	Synpcc7942_1905	0.75	+2.7
1,981,787	-	hlyB	Synpcc7942_1905	0.76	+0.8
1,981,813	-	hlyB	Synpcc7942_1905	0.77	+0.5
1,981,822	-	hlyB	Synpcc7942_1905	0.77	+1.5
1,981,849	-	hlyB	Synpcc7942_1905	0.78	+0.4
1,981,851	+				-1.1
1,981,854	-	hlyB	Synpcc7942_1905	0.79	+0.9
1,981,859	-	hlyB	Synpcc7942_1905	0.79	+0.2
1,981,875	+	hlyB	Synpcc7942_1905	0.79	+2.4
1,981,883	-	hlyB	Synpcc7942_1905	0.79	+2.9
1,981,883	-	hlyB	Synpcc7942_1905	0.79	-0.3
1,981,906	-	hlyB	Synpcc7942_1905	0.80	+2.9
1,981,932	+	hlyB	Synpcc7942_1905	0.81	+1.7
1,981,942	+	hlyB	Synpcc7942_1905	0.81	-1.7
1,981,963	+	hlyB	Synpcc7942_1905	0.82	+1.2
1,981,965	+	hlyB	Synpcc7942_1905	0.82	+1.0
1,981,973	-	hlyB	Synpcc7942_1905	0.82	+1.9
1,981,973	-	hlyB	Synpcc7942_1905	0.82	+0.5
1,982,018	-	hlyB	Synpcc7942_1905	0.84	-1.2
1,982,029	-	hlyB	Synpcc7942_1905	0.84	+1.7
1,982,031	+	hlyB	Synpcc7942_1905	0.84	+2.9
1,982,031	+	hlyB	Synpcc7942_1905	0.84	-0.8
1,982,031	+	hlyB	Synpcc7942_1905	0.84	+0.6
1,982,034	-	hlyB	Synpcc7942_1905	0.85	+0.7
1,982,039	-	hlyB	Synpcc7942_1905	0.85	+0.4
1,982,039	-	hlyB	Synpcc7942_1905	0.85	+2.2
1,982,039	-	hlyB	Synpcc7942_1905	0.85	-0.1
1,982,052	+	hlyB	Synpcc7942_1905	0.85	+1.0
1,982,052	+	hlyB	Synpcc7942_1905	0.85	-0.5
1,982,061	-	hlyB	Synpcc7942_1905	0.85	+0.6
1,982,066	-	hlyB	Synpcc7942_1905	0.86	-0.8
1,982,160	+				+2.7
1,982,174	+	hlyB	Synpcc7942_1905	0.89	+0.8
1,982,206	+				+1.2
1,982,214	-				+0.9
1,982,223	+				-0.7
1,982,250	-				+0.5
1,982,272	-				-1.4
1,982,278	-				-1.1
1,982,321	-				+1.2
1,982,340	-				-0.1
1,982,344	-				+1.5
1,982,354	+				-0.1
1,982,354	+				-1.0
1,982,362	-				+1.6
1,982,362	-				+0.2
1,982,362	-				+0.0
1,982,364	+				-0.2
1,982,372	-				-0.7
1,982,403	-				+1.9
1,982,424	-				+0.7
1,982,529	-				-0.1
1,982,529	-				+0.1
1,982,592	+		Synpcc7942_1906	0.11	-1.8
1,982,610	+		Synpcc7942_1906	0.13	+2.6
1,982,618	-		Synpcc7942_1906	0.14	-0.7
1,982,687	-		Synpcc7942_1906	0.23	-0.9
1,982,704	-		Synpcc7942_1906	0.26	-0.7
1,982,712	+		Synpcc7942_1906	0.27	-3.1
1,982,712	+		Synpcc7942_1906	0.27	+0.3
1,982,717	+		Synpcc7942_1906	0.28	+1.1
1,982,726	+		Synpcc7942_1906	0.29	+0.4
1,982,731	-		Synpcc7942_1906	0.29	+0.7
1,982,736	+		Synpcc7942_1906	0.30	-0.7
1,982,762	-		Synpcc7942_1906	0.34	-2.4
1,982,884	+		Synpcc7942_1906	0.50	+0.9
1,983,026	+		Synpcc7942_1906	0.69	-1.0
1,983,039	-		Synpcc7942_1906	0.71	+1.2
1,983,055	+		Synpcc7942_1906	0.73	+1.3
1,983,069	+		Synpcc7942_1906	0.75	-0.1
1,983,101	-		Synpcc7942_1906	0.79	-0.1
1,983,135	+		Synpcc7942_1906	0.84	+0.4
1,983,153	-		Synpcc7942_1906	0.86	+1.2
1,983,165	+		Synpcc7942_1906	0.88	-0.7
1,983,170	+		Synpcc7942_1906	0.89	-1.1
1,983,175	+		Synpcc7942_1906	0.89	-0.1
1,983,178	-		Synpcc7942_1906	0.90	+1.0
1,983,178	-		Synpcc7942_1906	0.90	+0.9
1,983,199	-				+0.9
1,983,209	+				+1.1
1,983,229	+				+1.7
1,983,242	+				-1.7
1,983,272	+				-0.2
1,983,272	+				+0.6
1,983,272	+				-1.1
1,983,272	+				+1.7
1,983,272	+				+0.2
1,983,272	+				+1.0
1,983,280	-				-0.6
1,983,280	-				+2.0
1,983,280	-				+1.8
1,983,280	-				-1.7
1,983,280	-				+0.2
1,983,280	-				-1.1
1,983,280	-				+1.4
1,983,280	-				+2.1
1,983,280	-				+1.2
1,983,280	-				+0.4
1,983,280	-				+1.8
1,983,280	-				+0.7
1,983,289	+				-1.1
1,983,303	+				-0.8
1,983,349	-				-1.1
1,983,358	+				+0.9
1,983,399	+				+1.0
1,983,407	-				+0.1
1,983,409	+				-2.9