Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1880

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,951,826	+	moxR	Synpcc7942_1879	0.19	+0.4
1,951,858	+	moxR	Synpcc7942_1879	0.22	-0.0
1,951,861	+				-1.7
1,951,869	-	moxR	Synpcc7942_1879	0.23	-0.5
1,951,892	+	moxR	Synpcc7942_1879	0.26	-1.1
1,951,900	-	moxR	Synpcc7942_1879	0.27	+3.2
1,951,962	-	moxR	Synpcc7942_1879	0.33	-1.8
1,951,976	-	moxR	Synpcc7942_1879	0.35	+0.6
1,951,992	+	moxR	Synpcc7942_1879	0.37	-0.8
1,951,992	+	moxR	Synpcc7942_1879	0.37	+0.9
1,952,052	-	moxR	Synpcc7942_1879	0.43	+0.3
1,952,054	+	moxR	Synpcc7942_1879	0.43	+1.1
1,952,062	-				-0.1
1,952,091	+	moxR	Synpcc7942_1879	0.47	+1.2
1,952,109	-	moxR	Synpcc7942_1879	0.49	-0.5
1,952,180	-	moxR	Synpcc7942_1879	0.57	-1.4
1,952,187	-	moxR	Synpcc7942_1879	0.57	-0.2
1,952,208	+	moxR	Synpcc7942_1879	0.60	+0.3
1,952,208	+	moxR	Synpcc7942_1879	0.60	-1.7
1,952,210	+	moxR	Synpcc7942_1879	0.60	+2.5
1,952,216	-	moxR	Synpcc7942_1879	0.60	+0.8
1,952,397	+	moxR	Synpcc7942_1879	0.80	+0.6
1,952,410	-	moxR	Synpcc7942_1879	0.81	+1.2
1,952,480	+	moxR	Synpcc7942_1879	0.88	-1.7
1,952,533	-				+0.5
1,952,542	-				+1.2
1,952,542	-				+0.4
1,952,546	+				+1.4
1,952,568	+				+1.0
1,952,579	+				+0.7
1,952,592	-				+2.4
1,952,592	-				+0.4
1,952,592	-				+0.4
1,952,594	+				+0.7
1,952,599	+				-1.4
1,952,602	-				-0.1
1,952,624	-				-1.1
1,952,630	+				+0.9
1,952,637	-				-0.1
1,952,654	+				+0.7
1,952,662	-				-1.0
1,952,668	-				+1.8
1,952,685	-				-2.4
1,952,712	+				-0.6
1,952,773	+				-1.1
1,952,781	-				+1.1
1,952,797	+				-0.1
1,952,807	+				+0.1
1,952,809	+				-0.4
1,952,809	+				+0.2
1,952,856	+		Synpcc7942_1880	0.18	-2.7
1,952,898	+		Synpcc7942_1880	0.38	+0.2
1,952,898	+		Synpcc7942_1880	0.38	+0.7
1,952,902	+				-1.1
1,952,999	+		Synpcc7942_1880	0.87	+1.4
1,953,006	+				-0.1
1,953,007	-				+1.0
1,953,098	-				+1.0
1,953,108	+				+0.5
1,953,127	-				-1.4
1,953,172	-				-1.7
1,953,234	-				-0.1
1,953,303	-	nadB	Synpcc7942_1881	0.14	-1.1
1,953,376	-	nadB	Synpcc7942_1881	0.18	-1.6
1,953,376	-	nadB	Synpcc7942_1881	0.18	-1.1
1,953,376	-	nadB	Synpcc7942_1881	0.18	-2.4
1,953,431	-	nadB	Synpcc7942_1881	0.22	-3.1
1,953,613	-	nadB	Synpcc7942_1881	0.33	-3.3
1,953,632	-	nadB	Synpcc7942_1881	0.34	-2.9
1,953,644	-	nadB	Synpcc7942_1881	0.34	-2.1
1,953,651	-	nadB	Synpcc7942_1881	0.35	-1.1
1,953,670	+	nadB	Synpcc7942_1881	0.36	-2.1
1,953,675	+	nadB	Synpcc7942_1881	0.36	-2.1
1,953,678	-	nadB	Synpcc7942_1881	0.37	-1.7
1,953,698	+	nadB	Synpcc7942_1881	0.38	-2.9
1,953,698	-	nadB	Synpcc7942_1881	0.38	-0.1
1,953,819	+	nadB	Synpcc7942_1881	0.45	-2.1
1,953,827	-	nadB	Synpcc7942_1881	0.46	-2.1
1,953,829	+	nadB	Synpcc7942_1881	0.46	-3.7
1,953,859	+	nadB	Synpcc7942_1881	0.47	-1.7
1,953,959	+	nadB	Synpcc7942_1881	0.54	-2.7
1,953,965	+	nadB	Synpcc7942_1881	0.54	-1.7
1,953,999	+	nadB	Synpcc7942_1881	0.56	-2.1
1,954,012	-	nadB	Synpcc7942_1881	0.57	-2.4