Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1754

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,821,400	+		Synpcc7942_1752	0.51	-2.7
1,821,795	+				+1.7
1,821,801	+				-0.8
1,821,810	+				+0.9
1,821,813	-				-0.8
1,821,813	-				+0.6
1,821,837	+				+1.5
1,821,875	+				-1.1
1,821,897	+				-0.5
1,821,905	-				-0.9
1,821,914	-				-0.9
1,821,924	+				+0.7
1,821,940	+		Synpcc7942_1753	0.11	-2.1
1,821,948	-		Synpcc7942_1753	0.12	+0.9
1,821,948	-		Synpcc7942_1753	0.12	-1.3
1,821,976	+		Synpcc7942_1753	0.18	+1.7
1,821,977	-				-0.1
1,821,984	-		Synpcc7942_1753	0.20	+0.3
1,821,984	-		Synpcc7942_1753	0.20	-1.1
1,821,999	+		Synpcc7942_1753	0.23	-2.1
1,821,999	+		Synpcc7942_1753	0.23	+1.9
1,822,006	-		Synpcc7942_1753	0.25	+2.7
1,822,007	-		Synpcc7942_1753	0.25	+0.4
1,822,016	+		Synpcc7942_1753	0.27	-0.4
1,822,016	+		Synpcc7942_1753	0.27	-2.5
1,822,024	-		Synpcc7942_1753	0.29	+1.6
1,822,048	+		Synpcc7942_1753	0.34	-1.1
1,822,071	-		Synpcc7942_1753	0.39	+0.2
1,822,074	+		Synpcc7942_1753	0.40	+0.3
1,822,082	-		Synpcc7942_1753	0.41	+0.6
1,822,082	-		Synpcc7942_1753	0.41	-0.7
1,822,120	-		Synpcc7942_1753	0.49	-1.1
1,822,134	+		Synpcc7942_1753	0.52	-1.1
1,822,134	+		Synpcc7942_1753	0.52	+1.6
1,822,134	+		Synpcc7942_1753	0.52	-0.6
1,822,134	+		Synpcc7942_1753	0.52	+1.0
1,822,141	+		Synpcc7942_1753	0.54	+0.5
1,822,142	-		Synpcc7942_1753	0.54	+1.9
1,822,182	-		Synpcc7942_1753	0.63	-0.5
1,822,221	+		Synpcc7942_1753	0.71	-0.9
1,822,221	+		Synpcc7942_1753	0.71	+3.5
1,822,226	+		Synpcc7942_1753	0.72	-0.9
1,822,229	-		Synpcc7942_1753	0.73	-0.1
1,822,232	+		Synpcc7942_1753	0.74	+0.2
1,822,240	-		Synpcc7942_1753	0.75	-0.1
1,822,258	-		Synpcc7942_1753	0.79	+0.5
1,822,267	-		Synpcc7942_1753	0.81	-1.7
1,822,267	-		Synpcc7942_1753	0.81	-0.1
1,822,267	-		Synpcc7942_1753	0.81	-1.0
1,822,299	-		Synpcc7942_1753	0.88	+1.6
1,822,321	-				-0.0
1,822,325	+				+0.2
1,822,325	+				+0.9
1,822,325	+				+0.3
1,822,325	+				+1.9
1,822,325	+				-0.4
1,822,333	-				+0.9
1,822,337	+				-3.1
1,822,465	+		Synpcc7942_1754	0.78	+1.6
1,822,465	+		Synpcc7942_1754	0.78	+0.1
1,822,465	+		Synpcc7942_1754	0.78	+2.7
1,822,473	-		Synpcc7942_1754	0.84	+0.1
1,822,473	-		Synpcc7942_1754	0.84	+0.6
1,822,482	-				+1.4
1,822,493	-				-0.1
1,822,583	-				+1.8
1,822,600	+				-2.5
1,822,619	+				-0.6
1,822,625	-				+1.1
1,822,625	-				+0.6
1,822,627	+				+0.3
1,822,632	-				+0.0
1,822,681	-		Synpcc7942_1755	0.11	+0.2
1,822,683	+		Synpcc7942_1755	0.11	-1.0
1,822,733	+		Synpcc7942_1755	0.14	-0.8
1,822,741	-		Synpcc7942_1755	0.14	+1.5
1,822,743	+		Synpcc7942_1755	0.14	-1.7
1,822,759	+		Synpcc7942_1755	0.15	+0.9
1,822,797	+		Synpcc7942_1755	0.17	-0.5
1,822,892	-		Synpcc7942_1755	0.23	-2.9
1,822,896	+		Synpcc7942_1755	0.23	+1.4
1,822,897	-		Synpcc7942_1755	0.23	+1.2
1,822,943	+				-2.9
1,822,948	+		Synpcc7942_1755	0.26	+1.1
1,822,969	-		Synpcc7942_1755	0.27	+0.5
1,822,988	+		Synpcc7942_1755	0.28	-0.7
1,822,990	-		Synpcc7942_1755	0.29	+0.5
1,822,994	+		Synpcc7942_1755	0.29	+1.3
1,822,996	-		Synpcc7942_1755	0.29	-2.1
1,823,002	-		Synpcc7942_1755	0.29	+0.5
1,823,002	-		Synpcc7942_1755	0.29	+0.8
1,823,002	-		Synpcc7942_1755	0.29	-0.1
1,823,019	+		Synpcc7942_1755	0.30	+1.8
1,823,019	+		Synpcc7942_1755	0.30	+0.5
1,823,027	-		Synpcc7942_1755	0.31	+2.7
1,823,038	-		Synpcc7942_1755	0.31	+2.5
1,823,070	-		Synpcc7942_1755	0.33	-0.8
1,823,101	+		Synpcc7942_1755	0.35	+0.2
1,823,119	-		Synpcc7942_1755	0.36	-1.1
1,823,127	-		Synpcc7942_1755	0.37	-1.3
1,823,132	-		Synpcc7942_1755	0.37	-0.3
1,823,147	+		Synpcc7942_1755	0.38	+1.4
1,823,154	-		Synpcc7942_1755	0.38	-2.3
1,823,163	-		Synpcc7942_1755	0.39	+1.1
1,823,165	+		Synpcc7942_1755	0.39	-1.0
1,823,165	+		Synpcc7942_1755	0.39	-0.5
1,823,165	+		Synpcc7942_1755	0.39	-2.1
1,823,173	-		Synpcc7942_1755	0.39	+1.8
1,823,173	-		Synpcc7942_1755	0.39	-0.7
1,823,173	-		Synpcc7942_1755	0.39	-1.6
1,823,173	-		Synpcc7942_1755	0.39	-1.0
1,823,244	-		Synpcc7942_1755	0.43	-2.7
1,823,244	-		Synpcc7942_1755	0.43	-1.6
1,823,307	+		Synpcc7942_1755	0.47	-0.4
1,823,311	-		Synpcc7942_1755	0.47	-0.9
1,823,311	-		Synpcc7942_1755	0.47	-1.7
1,823,311	-		Synpcc7942_1755	0.47	-0.9
1,823,349	-		Synpcc7942_1755	0.49	-0.8
1,823,360	+		Synpcc7942_1755	0.50	-0.5
1,823,462	+		Synpcc7942_1755	0.56	+1.3
1,823,476	-		Synpcc7942_1755	0.57	+0.4
1,823,478	-		Synpcc7942_1755	0.57	-1.0
1,823,483	+				-1.1
1,823,483	+		Synpcc7942_1755	0.57	-2.5
1,823,491	-		Synpcc7942_1755	0.57	-0.5
1,823,491	-		Synpcc7942_1755	0.57	-1.2