Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1670

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,740,726	+	kdpB	Synpcc7942_1669	0.54	-1.8
1,740,780	+	kdpB	Synpcc7942_1669	0.57	-0.1
1,740,794	+	kdpB	Synpcc7942_1669	0.57	+1.6
1,740,818	-	kdpB	Synpcc7942_1669	0.58	+0.5
1,740,819	-	kdpB	Synpcc7942_1669	0.59	+0.8
1,740,997	+	kdpB	Synpcc7942_1669	0.67	-2.5
1,741,027	-	kdpB	Synpcc7942_1669	0.68	+2.0
1,741,056	+	kdpB	Synpcc7942_1669	0.70	-0.1
1,741,117	-	kdpB	Synpcc7942_1669	0.73	-0.4
1,741,134	-	kdpB	Synpcc7942_1669	0.74	+1.3
1,741,152	-	kdpB	Synpcc7942_1669	0.74	+0.6
1,741,158	+	kdpB	Synpcc7942_1669	0.75	-1.8
1,741,158	+	kdpB	Synpcc7942_1669	0.75	+0.4
1,741,159	+	kdpB	Synpcc7942_1669	0.75	+0.2
1,741,184	-				-2.1
1,741,258	+	kdpB	Synpcc7942_1669	0.80	-0.1
1,741,308	+	kdpB	Synpcc7942_1669	0.82	+1.5
1,741,310	-	kdpB	Synpcc7942_1669	0.82	-0.1
1,741,321	+	kdpB	Synpcc7942_1669	0.83	+0.5
1,741,362	+	kdpB	Synpcc7942_1669	0.85	+0.6
1,741,392	-	kdpB	Synpcc7942_1669	0.86	+0.9
1,741,392	-	kdpB	Synpcc7942_1669	0.86	-1.0
1,741,395	+	kdpB	Synpcc7942_1669	0.86	+0.7
1,741,422	-	kdpB	Synpcc7942_1669	0.87	+0.5
1,741,424	+	kdpB	Synpcc7942_1669	0.87	-0.5
1,741,435	-	kdpB	Synpcc7942_1669	0.88	-1.6
1,741,445	-	kdpB	Synpcc7942_1669	0.88	+0.4
1,741,447	+	kdpB	Synpcc7942_1669	0.89	+0.5
1,741,461	+	kdpB	Synpcc7942_1669	0.89	+1.1
1,741,461	+	kdpB	Synpcc7942_1669	0.89	+0.0
1,741,461	+	kdpB	Synpcc7942_1669	0.89	+0.2
1,741,461	+	kdpB	Synpcc7942_1669	0.89	+1.1
1,741,469	-	kdpB	Synpcc7942_1669	0.90	+0.6
1,741,469	-	kdpB	Synpcc7942_1669	0.90	-0.5
1,741,469	-	kdpB	Synpcc7942_1669	0.90	-1.5
1,741,479	-				-1.4
1,741,479	-				+1.6
1,741,492	+				-0.5
1,741,497	+				-2.9
1,741,499	+				-1.8
1,741,509	+				-0.1
1,741,549	-				-0.1
1,741,549	-				+0.4
1,741,557	-				-1.7
1,741,596	+				+0.6
1,741,604	-				-0.4
1,741,604	-				-0.5
1,741,657	-				-0.5
1,741,707	+		Synpcc7942_1670	0.14	+2.4
1,741,709	+		Synpcc7942_1670	0.15	+2.4
1,741,709	+		Synpcc7942_1670	0.15	-0.8
1,741,735	+		Synpcc7942_1670	0.33	+0.1
1,741,735	+		Synpcc7942_1670	0.33	+1.2
1,741,737	+		Synpcc7942_1670	0.34	+1.5
1,741,739	-		Synpcc7942_1670	0.35	+2.7
1,741,773	-		Synpcc7942_1670	0.59	+0.0
1,741,775	+		Synpcc7942_1670	0.60	-0.1
1,741,792	+		Synpcc7942_1670	0.71	+1.9
1,741,808	-		Synpcc7942_1670	0.82	+0.1
1,741,808	-		Synpcc7942_1670	0.82	-0.1
1,741,812	+		Synpcc7942_1670	0.85	-0.0
1,741,812	+		Synpcc7942_1670	0.85	-0.5
1,741,820	-				-0.1
1,741,820	-				+1.2
1,741,858	-				-0.0
1,741,901	+	kdpC	Synpcc7942_1671	0.11	-2.5
1,741,901	+	kdpC	Synpcc7942_1671	0.11	+1.3
1,741,901	+	kdpC	Synpcc7942_1671	0.11	-1.7
1,741,901	+	kdpC	Synpcc7942_1671	0.11	-1.0
1,741,909	+	kdpC	Synpcc7942_1671	0.12	+0.9
1,741,909	-	kdpC	Synpcc7942_1671	0.12	-0.1
1,741,919	+	kdpC	Synpcc7942_1671	0.14	-0.0
1,741,940	-	kdpC	Synpcc7942_1671	0.17	+2.2
1,741,943	-	kdpC	Synpcc7942_1671	0.17	-1.7
1,741,947	+	kdpC	Synpcc7942_1671	0.18	-1.1
1,742,039	-	kdpC	Synpcc7942_1671	0.33	-2.7
1,742,049	-	kdpC	Synpcc7942_1671	0.35	+1.4
1,742,055	+	kdpC	Synpcc7942_1671	0.36	+1.7
1,742,056	-	kdpC	Synpcc7942_1671	0.36	-0.7
1,742,122	-	kdpC	Synpcc7942_1671	0.47	-0.3
1,742,128	+	kdpC	Synpcc7942_1671	0.48	+0.1
1,742,128	+	kdpC	Synpcc7942_1671	0.48	-0.1
1,742,128	+	kdpC	Synpcc7942_1671	0.48	-0.9
1,742,128	+	kdpC	Synpcc7942_1671	0.48	-1.1
1,742,128	+	kdpC	Synpcc7942_1671	0.48	+0.1
1,742,128	+	kdpC	Synpcc7942_1671	0.48	-0.2
1,742,128	+	kdpC	Synpcc7942_1671	0.48	+1.2
1,742,136	-	kdpC	Synpcc7942_1671	0.49	-0.7
1,742,136	-	kdpC	Synpcc7942_1671	0.49	-1.1
1,742,136	-	kdpC	Synpcc7942_1671	0.49	-2.1
1,742,136	-	kdpC	Synpcc7942_1671	0.49	+1.5
1,742,136	-	kdpC	Synpcc7942_1671	0.49	-0.3
1,742,136	-	kdpC	Synpcc7942_1671	0.49	+0.2
1,742,136	-	kdpC	Synpcc7942_1671	0.49	-0.1
1,742,188	+	kdpC	Synpcc7942_1671	0.58	+1.1
1,742,241	-	kdpC	Synpcc7942_1671	0.66	-1.1
1,742,261	+	kdpC	Synpcc7942_1671	0.69	+0.2
1,742,370	+	kdpC	Synpcc7942_1671	0.87	+1.9
1,742,372	+	kdpC	Synpcc7942_1671	0.88	-1.1
1,742,397	+				+1.7
1,742,422	-				-0.1
1,742,441	+				+0.1
1,742,462	+				-0.4
1,742,464	+				-0.0
1,742,467	+				-2.1
1,742,470	-				+0.3
1,742,477	+				+1.0
1,742,498	+				-0.3
1,742,522	+				+1.5
1,742,548	+				-1.1
1,742,585	+	vanY	Synpcc7942_1672	0.11	+0.9
1,742,599	-	vanY	Synpcc7942_1672	0.13	+0.5
1,742,599	-	vanY	Synpcc7942_1672	0.13	-0.3
1,742,599	-	vanY	Synpcc7942_1672	0.13	-0.3
1,742,604	-	vanY	Synpcc7942_1672	0.13	-1.1
1,742,654	-	vanY	Synpcc7942_1672	0.20	+0.5
1,742,665	+	vanY	Synpcc7942_1672	0.22	+3.2
1,742,683	-	vanY	Synpcc7942_1672	0.24	-0.1
1,742,706	+	vanY	Synpcc7942_1672	0.27	-0.1
1,742,740	-	vanY	Synpcc7942_1672	0.32	+1.9
1,742,774	-	vanY	Synpcc7942_1672	0.37	+0.9
1,742,774	-	vanY	Synpcc7942_1672	0.37	-2.1
1,742,781	+	vanY	Synpcc7942_1672	0.38	+0.8