Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1658

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,727,823	-	katG	Synpcc7942_1656	0.88	+1.0
1,727,895	+				+1.1
1,728,046	+				+2.9
1,728,206	-				+0.1
1,728,243	-				-1.3
1,728,245	+				+1.2
1,728,250	-				-0.3
1,728,281	-				+0.0
1,728,378	+				+0.6
1,728,401	-				+0.7
1,728,405	+				-2.4
1,728,408	-				+0.9
1,728,410	+				-1.1
1,728,421	+				-0.9
1,728,422	+				+0.9
1,728,422	+				+0.7
1,728,422	+				-1.3
1,728,512	+		Synpcc7942_1657	0.27	+2.0
1,728,515	+		Synpcc7942_1657	0.28	-0.1
1,728,535	-		Synpcc7942_1657	0.37	+1.9
1,728,548	+		Synpcc7942_1657	0.43	+3.4
1,728,569	-		Synpcc7942_1657	0.52	-1.1
1,728,569	-		Synpcc7942_1657	0.52	-1.0
1,728,643	+		Synpcc7942_1657	0.86	-0.6
1,728,643	+		Synpcc7942_1657	0.86	-0.7
1,728,648	+		Synpcc7942_1657	0.88	+0.1
1,728,661	-				+2.4
1,728,715	+				-2.7
1,728,733	-				+0.0
1,728,735	+				-1.5
1,728,735	+				+2.5
1,728,743	-				+1.9
1,728,743	-				+0.8
1,728,751	-				-3.1
1,728,785	-				+0.9
1,728,875	+		Synpcc7942_1658	0.19	+1.4
1,728,875	+		Synpcc7942_1658	0.19	-1.7
1,728,883	-		Synpcc7942_1658	0.21	-0.6
1,728,951	-		Synpcc7942_1658	0.36	+1.6
1,728,951	-				-2.4
1,728,955	+		Synpcc7942_1658	0.36	-3.1
1,728,965	+		Synpcc7942_1658	0.39	+1.1
1,728,982	+		Synpcc7942_1658	0.42	+0.7
1,728,999	+		Synpcc7942_1658	0.46	+1.6
1,729,002	-		Synpcc7942_1658	0.47	+0.0
1,729,007	-		Synpcc7942_1658	0.48	+0.8
1,729,018	-		Synpcc7942_1658	0.50	+0.6
1,729,030	-		Synpcc7942_1658	0.53	+2.3
1,729,034	+		Synpcc7942_1658	0.54	+0.6
1,729,034	+		Synpcc7942_1658	0.54	-2.1
1,729,045	+		Synpcc7942_1658	0.56	-1.1
1,729,045	+		Synpcc7942_1658	0.56	-0.7
1,729,045	+		Synpcc7942_1658	0.56	-2.4
1,729,045	+		Synpcc7942_1658	0.56	+1.6
1,729,100	+		Synpcc7942_1658	0.68	-0.1
1,729,108	-		Synpcc7942_1658	0.70	-0.1
1,729,163	-		Synpcc7942_1658	0.82	+1.5
1,729,186	+		Synpcc7942_1658	0.87	+0.9
1,729,188	-		Synpcc7942_1658	0.87	+0.6
1,729,194	-		Synpcc7942_1658	0.88	-0.1
1,729,194	-		Synpcc7942_1658	0.88	+2.0
1,729,194	-		Synpcc7942_1658	0.88	-1.1
1,729,217	-				+1.2
1,729,223	+				-0.1
1,729,223	+				+1.2
1,729,223	+				-1.7
1,729,231	-				+1.6
1,729,244	-				+0.4
1,729,255	-				+1.0
1,729,272	-				+0.8
1,729,293	-				-0.8
1,729,311	+				+0.2
1,729,311	+				+1.1
1,729,319	-				-0.8
1,729,340	+				+1.4
1,729,359	-				-0.5
1,729,359	-				-2.4
1,729,361	+				-0.5
1,729,374	-				-1.1
1,729,387	-				+1.3
1,729,415	-				-0.1
1,729,423	-				+0.2
1,729,483	-		Synpcc7942_1659	0.15	-0.6
1,729,496	+		Synpcc7942_1659	0.17	+0.8
1,729,496	+		Synpcc7942_1659	0.17	-1.0
1,729,496	+		Synpcc7942_1659	0.17	-0.3
1,729,501	+		Synpcc7942_1659	0.18	-0.3
1,729,504	-		Synpcc7942_1659	0.19	-0.0
1,729,504	-		Synpcc7942_1659	0.19	-0.5
1,729,514	+		Synpcc7942_1659	0.20	-0.1
1,729,520	-		Synpcc7942_1659	0.21	-0.9
1,729,531	-		Synpcc7942_1659	0.23	+0.6
1,729,532	-		Synpcc7942_1659	0.23	-3.3
1,729,556	+		Synpcc7942_1659	0.27	+0.3
1,729,564	-		Synpcc7942_1659	0.28	+1.3
1,729,564	-		Synpcc7942_1659	0.28	-3.1
1,729,564	-		Synpcc7942_1659	0.28	-0.7
1,729,564	-		Synpcc7942_1659	0.28	+0.8
1,729,589	+		Synpcc7942_1659	0.32	-0.5
1,729,589	+		Synpcc7942_1659	0.32	+1.3
1,729,589	+		Synpcc7942_1659	0.32	-1.1
1,729,589	+		Synpcc7942_1659	0.32	+1.1
1,729,597	-		Synpcc7942_1659	0.33	-0.1
1,729,597	-		Synpcc7942_1659	0.33	-2.4
1,729,597	-		Synpcc7942_1659	0.33	-3.3
1,729,597	-		Synpcc7942_1659	0.33	-0.7
1,729,599	+		Synpcc7942_1659	0.33	+0.9
1,729,606	-		Synpcc7942_1659	0.34	-0.9
1,729,618	-		Synpcc7942_1659	0.36	-1.4
1,729,651	-		Synpcc7942_1659	0.41	-2.4
1,729,659	+		Synpcc7942_1659	0.42	+0.2
1,729,663	-		Synpcc7942_1659	0.43	-1.1
1,729,678	+		Synpcc7942_1659	0.45	+0.9
1,729,769	+		Synpcc7942_1659	0.59	-2.4
1,729,785	+		Synpcc7942_1659	0.62	+0.2
1,729,785	+		Synpcc7942_1659	0.62	+0.8
1,729,798	+		Synpcc7942_1659	0.64	+0.3
1,729,803	+		Synpcc7942_1659	0.65	-0.1
1,729,803	+		Synpcc7942_1659	0.65	+2.3
1,729,840	+		Synpcc7942_1659	0.70	+0.5
1,729,855	+		Synpcc7942_1659	0.73	-2.4
1,729,908	+		Synpcc7942_1659	0.81	-0.2
1,729,909	+		Synpcc7942_1659	0.81	-2.7
1,729,909	+		Synpcc7942_1659	0.81	-0.4
1,729,915	-		Synpcc7942_1659	0.82	-0.7
1,729,917	-		Synpcc7942_1659	0.82	+1.5
1,729,917	-		Synpcc7942_1659	0.82	+0.9
1,729,933	+		Synpcc7942_1659	0.85	-3.1
1,729,933	+		Synpcc7942_1659	0.85	+1.9
1,729,941	-		Synpcc7942_1659	0.86	+1.7
1,729,941	-		Synpcc7942_1659	0.86	-0.7
1,729,953	-		Synpcc7942_1659	0.88	-1.2
1,729,981	+				-0.1
1,729,981	+				-1.3
1,729,981	+				-1.5
1,730,045	+				+0.8
1,730,047	-				-1.7
1,730,047	-				-0.9
1,730,060	+				+0.6
1,730,071	+				+0.7
1,730,079	-				-0.1
1,730,079	-				-1.7
1,730,091	-				-0.4
1,730,123	+				-0.7
1,730,131	-				+0.5
1,730,199	-				-0.5
1,730,199	-				+2.9
1,730,211	-				+0.8
1,730,211	-				-2.9
1,730,212	-				-2.0
1,730,212	-				+0.9
1,730,212	-				-2.1