Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1539

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,596,524	-	gat	Synpcc7942_1536	0.87	-0.1
1,596,531	+	gat	Synpcc7942_1536	0.88	+0.6
1,596,531	+	gat	Synpcc7942_1536	0.88	+0.5
1,596,531	+	gat	Synpcc7942_1536	0.88	-0.1
1,596,531	+	gat	Synpcc7942_1536	0.88	+0.4
1,596,531	+	gat	Synpcc7942_1536	0.88	-0.7
1,596,535	+	gat	Synpcc7942_1536	0.88	+0.8
1,596,538	-	gat	Synpcc7942_1536	0.89	+0.1
1,596,539	-	gat	Synpcc7942_1536	0.89	+2.2
1,596,539	-	gat	Synpcc7942_1536	0.89	-0.1
1,596,539	-	gat	Synpcc7942_1536	0.89	-2.4
1,596,627	+				-0.7
1,596,645	+				-0.4
1,596,651	+				+0.9
1,596,659	-				-1.1
1,596,678	-				-1.5
1,596,704	+	stbB	Synpcc7942_1537	0.17	+1.6
1,596,719	+	stbB	Synpcc7942_1537	0.24	-0.8
1,596,727	-	stbB	Synpcc7942_1537	0.28	-0.7
1,596,742	+	stbB	Synpcc7942_1537	0.35	-0.5
1,596,743	+	stbB	Synpcc7942_1537	0.36	+0.1
1,596,871	+				-1.4
1,596,879	-				+0.9
1,596,879	-				+0.4
1,596,879	-				-1.5
1,596,887	-				+0.4
1,596,897	-				+0.2
1,597,002	-				+1.6
1,597,016	+		Synpcc7942_1538	0.12	-2.1
1,597,086	+		Synpcc7942_1538	0.30	-3.6
1,597,225	+		Synpcc7942_1538	0.64	-0.5
1,597,225	+		Synpcc7942_1538	0.64	+1.5
1,597,233	-		Synpcc7942_1538	0.66	-0.1
1,597,276	+		Synpcc7942_1538	0.77	+0.1
1,597,389	+				+0.9
1,597,458	+				-2.7
1,597,466	+				+1.8
1,597,515	+				+0.5
1,597,515	+				+2.7
1,597,537	-				-1.2
1,597,539	+				-1.2
1,597,547	-		Synpcc7942_1539	0.10	-0.0
1,597,551	+		Synpcc7942_1539	0.12	-1.9
1,597,585	-		Synpcc7942_1539	0.23	-1.1
1,597,587	+		Synpcc7942_1539	0.23	+1.4
1,597,587	+		Synpcc7942_1539	0.23	-1.5
1,597,595	-		Synpcc7942_1539	0.26	-1.6
1,597,595	-		Synpcc7942_1539	0.26	+1.0
1,597,598	+		Synpcc7942_1539	0.27	+1.3
1,597,635	+		Synpcc7942_1539	0.39	+2.3
1,597,640	+		Synpcc7942_1539	0.41	+2.8
1,597,641	-		Synpcc7942_1539	0.41	+0.4
1,597,641	-		Synpcc7942_1539	0.41	-1.7
1,597,643	+		Synpcc7942_1539	0.42	-0.1
1,597,645	+		Synpcc7942_1539	0.43	+0.7
1,597,645	+		Synpcc7942_1539	0.43	+1.9
1,597,647	+		Synpcc7942_1539	0.43	+0.5
1,597,647	+		Synpcc7942_1539	0.43	+1.2
1,597,651	-		Synpcc7942_1539	0.45	-1.9
1,597,651	-		Synpcc7942_1539	0.45	+0.4
1,597,653	-		Synpcc7942_1539	0.45	+1.9
1,597,655	-		Synpcc7942_1539	0.46	+0.2
1,597,724	-		Synpcc7942_1539	0.69	+1.6
1,597,724	-		Synpcc7942_1539	0.69	-0.0
1,597,846	+				+0.5
1,597,846	+				+0.1
1,597,914	+				+0.6
1,598,003	-	isiC	Synpcc7942_1540	0.21	+3.1
1,598,003	-	isiC	Synpcc7942_1540	0.21	-2.1
1,598,322	+	isiC	Synpcc7942_1540	0.66	+1.7
1,598,358	-	isiC	Synpcc7942_1540	0.71	-0.1
1,598,408	+	isiC	Synpcc7942_1540	0.78	-0.9
1,598,418	+	isiC	Synpcc7942_1540	0.79	+0.0
1,598,446	+	isiC	Synpcc7942_1540	0.83	+0.4
1,598,513	+				+0.9
1,598,521	-				+2.0
1,598,535	-				+1.9
1,598,537	+				+1.0
1,598,545	-				+2.7
1,598,545	-				-0.7
1,598,555	-				-0.0
1,598,562	+				+1.6
1,598,608	+				-0.4
1,598,608	+				+0.3
1,598,616	-				+1.1
1,598,620	+				+0.6
1,598,620	+				+0.8
1,598,626	-				+1.4
1,598,654	+				+1.2
1,598,779	-	isiB	Synpcc7942_1541	0.24	-1.7
1,598,794	+	isiB	Synpcc7942_1541	0.27	+1.0