Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1392

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,436,923	-	comM	Synpcc7942_1391	0.50	+1.5
1,436,926	-	comM	Synpcc7942_1391	0.50	-1.1
1,436,936	+	comM	Synpcc7942_1391	0.51	+0.4
1,436,952	+	comM	Synpcc7942_1391	0.52	+1.1
1,436,952	+	comM	Synpcc7942_1391	0.52	+0.5
1,436,980	+	comM	Synpcc7942_1391	0.54	+2.7
1,437,051	-				-0.1
1,437,082	+	comM	Synpcc7942_1391	0.60	+0.3
1,437,082	+	comM	Synpcc7942_1391	0.60	-0.9
1,437,100	-	comM	Synpcc7942_1391	0.61	+0.6
1,437,105	+	comM	Synpcc7942_1391	0.62	-0.1
1,437,105	+	comM	Synpcc7942_1391	0.62	-0.8
1,437,143	+	comM	Synpcc7942_1391	0.64	+0.3
1,437,151	-	comM	Synpcc7942_1391	0.65	+0.6
1,437,207	+	comM	Synpcc7942_1391	0.68	+0.3
1,437,213	-	comM	Synpcc7942_1391	0.69	-1.1
1,437,213	-	comM	Synpcc7942_1391	0.69	+0.6
1,437,243	+	comM	Synpcc7942_1391	0.71	+0.5
1,437,246	-	comM	Synpcc7942_1391	0.71	+2.4
1,437,272	+	comM	Synpcc7942_1391	0.73	+0.3
1,437,286	-	comM	Synpcc7942_1391	0.74	-0.9
1,437,378	+	comM	Synpcc7942_1391	0.80	-1.1
1,437,390	-	comM	Synpcc7942_1391	0.80	+0.5
1,437,429	+	comM	Synpcc7942_1391	0.83	+0.9
1,437,435	-	comM	Synpcc7942_1391	0.83	-1.8
1,437,440	+	comM	Synpcc7942_1391	0.84	+0.7
1,437,441	+	comM	Synpcc7942_1391	0.84	-0.2
1,437,449	-	comM	Synpcc7942_1391	0.84	-2.4
1,437,461	-	comM	Synpcc7942_1391	0.85	-2.0
1,437,478	+	comM	Synpcc7942_1391	0.86	-2.7
1,437,478	+	comM	Synpcc7942_1391	0.86	-2.4
1,437,478	+	comM	Synpcc7942_1391	0.86	+1.9
1,437,486	-	comM	Synpcc7942_1391	0.87	+0.2
1,437,486	-	comM	Synpcc7942_1391	0.87	-1.1
1,437,486	-	comM	Synpcc7942_1391	0.87	-3.0
1,437,486	-	comM	Synpcc7942_1391	0.87	-2.4
1,437,496	+	comM	Synpcc7942_1391	0.87	+0.2
1,437,510	+	comM	Synpcc7942_1391	0.88	+0.2
1,437,512	+	comM	Synpcc7942_1391	0.88	+2.1
1,437,512	+	comM	Synpcc7942_1391	0.88	-0.7
1,437,517	+	comM	Synpcc7942_1391	0.89	-0.1
1,437,525	-	comM	Synpcc7942_1391	0.89	-2.1
1,437,563	+				-0.6
1,437,589	-				-0.9
1,437,596	-				+1.5
1,437,601	+				+0.9
1,437,609	-				-0.3
1,437,616	+				-0.4
1,437,624	-				-0.1
1,437,624	-				-0.1
1,437,626	+				+0.2
1,437,634	-				+1.2
1,437,634	-				+1.1
1,437,634	-				+0.3
1,437,644	+				+1.1
1,437,659	+				+1.1
1,437,659	+				-0.4
1,437,662	-				+1.5
1,437,662	-				+1.5
1,437,667	-				-2.1
1,437,667	-				-0.3
1,437,667	-				+2.7
1,437,667	-				-1.4
1,437,667	-				-4.2
1,437,667	-				+0.4
1,437,667	-				+1.1
1,437,671	+				+3.4
1,437,686	+				-0.8
1,437,699	-				-1.7
1,437,733	-				+0.9
1,437,737	+				+2.5
1,437,737	+				+0.3
1,437,747	+				+0.6
1,437,755	-				+0.6
1,437,762	+				-0.2
1,437,954	-				+0.5
1,438,001	+				-2.1
1,438,009	-				+0.3
1,438,011	+				-1.0
1,438,011	+				-0.5
1,438,011	+				+1.9
1,438,019	-				-0.1
1,438,019	-				+0.2
1,438,189	-				-0.4
1,438,204	+				+1.0
1,438,204	+				-0.1
1,438,296	-				+1.6
1,438,410	-	phoA	Synpcc7942_1392	0.12	+0.9
1,438,423	+	phoA	Synpcc7942_1392	0.12	-0.1
1,438,431	-	phoA	Synpcc7942_1392	0.13	+1.6
1,438,483	+	phoA	Synpcc7942_1392	0.14	-0.1
1,438,493	-	phoA	Synpcc7942_1392	0.14	+1.5
1,438,593	+	phoA	Synpcc7942_1392	0.17	+1.8
1,438,603	+	phoA	Synpcc7942_1392	0.17	+1.2
1,438,631	-	phoA	Synpcc7942_1392	0.18	+0.1
1,438,648	+	phoA	Synpcc7942_1392	0.18	+0.4
1,438,681	+	phoA	Synpcc7942_1392	0.19	+1.8
1,438,686	+	phoA	Synpcc7942_1392	0.19	+0.1
1,438,743	+	phoA	Synpcc7942_1392	0.20	+1.2
1,438,760	+	phoA	Synpcc7942_1392	0.21	+1.9
1,438,796	+	phoA	Synpcc7942_1392	0.22	+1.4
1,438,796	-	phoA	Synpcc7942_1392	0.22	-1.1
1,438,864	-	phoA	Synpcc7942_1392	0.23	+0.8
1,438,934	+	phoA	Synpcc7942_1392	0.25	+0.7
1,439,004	+	phoA	Synpcc7942_1392	0.27	+0.7
1,439,042	+	phoA	Synpcc7942_1392	0.28	+1.6
1,439,063	+	phoA	Synpcc7942_1392	0.28	+0.6
1,439,115	-	phoA	Synpcc7942_1392	0.29	-0.1
1,439,150	+	phoA	Synpcc7942_1392	0.30	-1.1
1,439,153	-	phoA	Synpcc7942_1392	0.30	+3.5
1,439,171	+	phoA	Synpcc7942_1392	0.31	+0.3
1,439,206	+	phoA	Synpcc7942_1392	0.32	-2.4
1,439,207	+	phoA	Synpcc7942_1392	0.32	-1.7
1,439,225	+	phoA	Synpcc7942_1392	0.32	-2.7
1,439,252	+	phoA	Synpcc7942_1392	0.33	+0.4
1,439,260	-	phoA	Synpcc7942_1392	0.33	+2.1
1,439,260	-	phoA	Synpcc7942_1392	0.33	+1.1
1,439,262	+	phoA	Synpcc7942_1392	0.33	+1.1
1,439,269	+	phoA	Synpcc7942_1392	0.33	+1.5
1,439,271	-	phoA	Synpcc7942_1392	0.33	-1.7
1,439,294	-	phoA	Synpcc7942_1392	0.34	+1.4
1,439,296	-	phoA	Synpcc7942_1392	0.34	-0.1
1,439,309	+	phoA	Synpcc7942_1392	0.34	+0.2
1,439,334	+	phoA	Synpcc7942_1392	0.35	-3.7
1,439,343	+	phoA	Synpcc7942_1392	0.35	-1.4
1,439,351	-	phoA	Synpcc7942_1392	0.35	+0.9
1,439,351	-	phoA	Synpcc7942_1392	0.35	-0.3
1,439,351	-	phoA	Synpcc7942_1392	0.35	-0.1
1,439,403	+				+1.9
1,439,423	-	phoA	Synpcc7942_1392	0.37	-1.7
1,439,427	+	phoA	Synpcc7942_1392	0.37	+0.5
1,439,427	+	phoA	Synpcc7942_1392	0.37	-0.4
1,439,427	+	phoA	Synpcc7942_1392	0.37	+1.3
1,439,431	-	phoA	Synpcc7942_1392	0.37	-0.4
1,439,432	+	phoA	Synpcc7942_1392	0.37	+1.7
1,439,435	-	phoA	Synpcc7942_1392	0.37	-1.4
1,439,466	-	phoA	Synpcc7942_1392	0.38	-0.1
1,439,567	+	phoA	Synpcc7942_1392	0.41	-1.1
1,439,567	+	phoA	Synpcc7942_1392	0.41	-0.3
1,439,575	-	phoA	Synpcc7942_1392	0.41	+1.5
1,439,575	-	phoA	Synpcc7942_1392	0.41	+0.7
1,439,575	-	phoA	Synpcc7942_1392	0.41	+0.9
1,439,579	+	phoA	Synpcc7942_1392	0.41	+0.7
1,439,598	-	phoA	Synpcc7942_1392	0.41	+2.6
1,439,641	+	phoA	Synpcc7942_1392	0.42	+0.7
1,439,644	-	phoA	Synpcc7942_1392	0.42	-1.1
1,439,691	-	phoA	Synpcc7942_1392	0.44	+0.5
1,439,781	-	phoA	Synpcc7942_1392	0.46	+1.2
1,439,782	-	phoA	Synpcc7942_1392	0.46	-1.7
1,439,856	-	phoA	Synpcc7942_1392	0.48	+1.6
1,439,866	+	phoA	Synpcc7942_1392	0.48	+1.5
1,439,867	-	phoA	Synpcc7942_1392	0.48	+0.2
1,439,892	+	phoA	Synpcc7942_1392	0.49	+1.0
1,439,892	+	phoA	Synpcc7942_1392	0.49	+0.7
1,439,909	-	phoA	Synpcc7942_1392	0.49	-0.3
1,439,917	+	phoA	Synpcc7942_1392	0.49	+0.5
1,440,058	+	phoA	Synpcc7942_1392	0.53	-1.1
1,440,091	-	phoA	Synpcc7942_1392	0.53	+1.2
1,440,158	+	phoA	Synpcc7942_1392	0.55	+2.2
1,440,166	-	phoA	Synpcc7942_1392	0.55	+1.9
1,440,183	+	phoA	Synpcc7942_1392	0.56	-2.1
1,440,183	+	phoA	Synpcc7942_1392	0.56	+0.4
1,440,196	-	phoA	Synpcc7942_1392	0.56	+1.8
1,440,235	-	phoA	Synpcc7942_1392	0.57	+0.4
1,440,332	-	phoA	Synpcc7942_1392	0.59	+0.5
1,440,369	-	phoA	Synpcc7942_1392	0.60	+1.2
1,440,455	+	phoA	Synpcc7942_1392	0.62	+1.4
1,440,509	-	phoA	Synpcc7942_1392	0.64	-1.1
1,440,556	+	phoA	Synpcc7942_1392	0.65	+3.3
1,440,578	-	phoA	Synpcc7942_1392	0.65	+1.7
1,440,579	-	phoA	Synpcc7942_1392	0.65	+0.9
1,440,689	+	phoA	Synpcc7942_1392	0.68	+0.6
1,440,724	+	phoA	Synpcc7942_1392	0.69	-0.9
1,440,754	+	phoA	Synpcc7942_1392	0.70	-2.9
1,440,911	-	phoA	Synpcc7942_1392	0.74	-0.1
1,440,914	+	phoA	Synpcc7942_1392	0.74	-1.1
1,440,973	+	phoA	Synpcc7942_1392	0.75	+1.9
1,441,185	-	phoA	Synpcc7942_1392	0.80	+3.3
1,441,358	-	phoA	Synpcc7942_1392	0.85	+0.5
1,441,366	+	phoA	Synpcc7942_1392	0.85	+2.8
1,441,402	-	phoA	Synpcc7942_1392	0.86	-3.3
1,441,424	+	phoA	Synpcc7942_1392	0.86	-0.5
1,441,558	+	phoA	Synpcc7942_1392	0.90	+0.2
1,441,566	-	phoA	Synpcc7942_1392	0.90	-1.1
1,441,566	-	phoA	Synpcc7942_1392	0.90	+0.9
1,441,573	+	phoA	Synpcc7942_1392	0.90	+1.2
1,441,606	+				-0.8
1,441,616	-				+0.9
1,441,620	-				+0.5
1,441,648	+				+0.3
1,441,649	+				+0.6
1,441,651	-				+2.8
1,441,657	-				-1.1
1,441,727	-				-3.0
1,441,753	+				+0.0
1,441,753	+				-0.1
1,441,761	-				-0.1
1,441,761	-				-0.4
1,441,771	-				+1.8
1,441,807	-				+1.1
1,441,888	+				-0.1
1,441,896	-				-0.8
1,441,985	+				+0.5
1,442,042	-				-1.1
1,442,083	+				+1.2
1,442,092	-				-1.1
1,442,138	-				-2.4
1,442,161	-				-1.1
1,442,186	-				-1.9
1,442,211	+				-0.5
1,442,396	+				-1.6
1,442,396	+				-2.0
1,442,396	+				+0.6
1,442,396	+				+3.0
1,442,416	+				-0.1
1,442,466	+				-0.4
1,442,473	+				-1.0
1,442,495	-				-0.1
1,442,496	+				-2.4
1,442,497	-				+1.4
1,442,501	+				-1.7
1,442,535	+				-2.3
1,442,543	-				+0.4
1,442,548	+				+3.0
1,442,555	+				-0.1
1,442,556	-				+1.0
1,442,595	+				+2.0
1,442,605	-		Synpcc7942_1393	0.11	-0.9
1,442,620	-		Synpcc7942_1393	0.13	-2.6
1,442,630	+		Synpcc7942_1393	0.14	+1.3
1,442,630	+		Synpcc7942_1393	0.14	-0.1
1,442,630	-		Synpcc7942_1393	0.14	-0.9
1,442,630	-		Synpcc7942_1393	0.14	-0.1
1,442,630	-		Synpcc7942_1393	0.14	-3.1
1,442,639	-		Synpcc7942_1393	0.15	-0.9
1,442,662	-		Synpcc7942_1393	0.17	+0.9
1,442,662	-		Synpcc7942_1393	0.17	+0.3
1,442,662	-		Synpcc7942_1393	0.17	+1.7
1,442,664	+		Synpcc7942_1393	0.17	+0.3
1,442,670	+		Synpcc7942_1393	0.18	-1.5
1,442,675	+		Synpcc7942_1393	0.19	-0.3
1,442,682	+		Synpcc7942_1393	0.19	-1.4
1,442,683	-		Synpcc7942_1393	0.20	+0.2
1,442,698	+		Synpcc7942_1393	0.21	-1.7
1,442,698	+		Synpcc7942_1393	0.21	-0.1
1,442,700	-		Synpcc7942_1393	0.21	-1.1
1,442,706	-		Synpcc7942_1393	0.22	+0.7
1,442,749	+		Synpcc7942_1393	0.27	+1.1
1,442,749	+		Synpcc7942_1393	0.27	-1.0
1,442,749	+		Synpcc7942_1393	0.27	+1.1
1,442,757	+		Synpcc7942_1393	0.28	-3.0
1,442,757	-		Synpcc7942_1393	0.28	-3.6
1,442,757	-		Synpcc7942_1393	0.28	+2.3
1,442,757	-		Synpcc7942_1393	0.28	-3.1
1,442,757	-		Synpcc7942_1393	0.28	+1.0
1,442,757	-		Synpcc7942_1393	0.28	+1.3
1,442,757	-		Synpcc7942_1393	0.28	-2.4
1,442,765	-		Synpcc7942_1393	0.29	-1.7
1,442,766	+		Synpcc7942_1393	0.29	-2.7
1,442,767	+		Synpcc7942_1393	0.29	+1.2
1,442,776	+		Synpcc7942_1393	0.30	+1.3
1,442,789	-		Synpcc7942_1393	0.31	+0.6
1,442,822	-		Synpcc7942_1393	0.35	-1.1
1,442,856	+		Synpcc7942_1393	0.38	+3.1
1,442,866	+		Synpcc7942_1393	0.40	+0.3
1,442,866	+		Synpcc7942_1393	0.40	+2.0
1,442,891	-		Synpcc7942_1393	0.42	-0.3
1,442,899	+		Synpcc7942_1393	0.43	-0.1
1,442,908	-		Synpcc7942_1393	0.44	+0.2
1,442,908	-		Synpcc7942_1393	0.44	+3.0
1,442,925	+		Synpcc7942_1393	0.46	+1.9
1,442,925	+		Synpcc7942_1393	0.46	+1.6
1,442,925	+		Synpcc7942_1393	0.46	+0.1