Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1362

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,400,699	+		Synpcc7942_1360	0.73	-3.7
1,400,725	+		Synpcc7942_1360	0.75	-1.9
1,400,730	+		Synpcc7942_1360	0.75	-1.1
1,400,730	+		Synpcc7942_1360	0.75	-3.1
1,400,733	-		Synpcc7942_1360	0.76	-2.9
1,400,733	-		Synpcc7942_1360	0.76	-2.9
1,400,787	+		Synpcc7942_1360	0.80	-2.2
1,400,795	-		Synpcc7942_1360	0.80	-0.4
1,400,797	+		Synpcc7942_1360	0.80	-3.3
1,400,807	+		Synpcc7942_1360	0.81	-2.8
1,400,815	-		Synpcc7942_1360	0.82	-2.4
1,400,815	-		Synpcc7942_1360	0.82	-3.8
1,400,819	+		Synpcc7942_1360	0.82	-2.8
1,400,854	+		Synpcc7942_1360	0.85	-0.4
1,400,861	+		Synpcc7942_1360	0.85	-2.1
1,400,871	+		Synpcc7942_1360	0.86	-3.7
1,400,871	+		Synpcc7942_1360	0.86	-3.4
1,400,874	-		Synpcc7942_1360	0.86	-6.1
1,400,879	-		Synpcc7942_1360	0.87	-5.0
1,400,879	-		Synpcc7942_1360	0.87	-2.4
1,400,879	-		Synpcc7942_1360	0.87	-2.8
1,400,879	-		Synpcc7942_1360	0.87	-0.1
1,400,882	+		Synpcc7942_1360	0.87	-5.1
1,400,898	+		Synpcc7942_1360	0.88	-2.7
1,400,923	-				-2.1
1,400,926	+				-3.1
1,400,962	+				-2.7
1,400,962	+				-1.7
1,400,965	-				-1.1
1,400,989	-				-2.1
1,401,040	+				-1.1
1,401,040	+				-1.7
1,401,052	+				+0.8
1,401,054	-				-1.1
1,401,059	+				+2.2
1,401,061	+				-2.7
1,401,080	+				-2.1
1,401,125	-				+1.1
1,401,153	+		Synpcc7942_1361	0.13	+1.6
1,401,156	+		Synpcc7942_1361	0.14	-0.6
1,401,233	-		Synpcc7942_1361	0.29	+0.5
1,401,289	-		Synpcc7942_1361	0.40	+2.2
1,401,325	-		Synpcc7942_1361	0.48	+2.3
1,401,355	+		Synpcc7942_1361	0.54	-1.1
1,401,355	+		Synpcc7942_1361	0.54	+1.4
1,401,355	+		Synpcc7942_1361	0.54	-1.1
1,401,355	+		Synpcc7942_1361	0.54	+2.1
1,401,355	+		Synpcc7942_1361	0.54	-0.5
1,401,363	-		Synpcc7942_1361	0.55	-0.7
1,401,363	-		Synpcc7942_1361	0.55	+1.3
1,401,363	-		Synpcc7942_1361	0.55	+0.2
1,401,365	+		Synpcc7942_1361	0.56	+0.1
1,401,367	+		Synpcc7942_1361	0.56	+0.2
1,401,375	-		Synpcc7942_1361	0.58	-0.1
1,401,395	+		Synpcc7942_1361	0.62	-1.1
1,401,400	+		Synpcc7942_1361	0.62	+1.9
1,401,400	+		Synpcc7942_1361	0.62	-2.7
1,401,408	-		Synpcc7942_1361	0.64	+0.7
1,401,419	+		Synpcc7942_1361	0.66	-0.8
1,401,419	+		Synpcc7942_1361	0.66	+0.4
1,401,425	-		Synpcc7942_1361	0.67	+0.2
1,401,431	+		Synpcc7942_1361	0.69	+2.2
1,401,462	+		Synpcc7942_1361	0.75	+0.7
1,401,543	+				+0.5
1,401,543	+				+0.0
1,401,562	+				+1.0
1,401,562	+				+1.2
1,401,571	+				+2.2
1,401,579	-				+1.4
1,401,579	-				+1.1
1,401,584	-				-0.1
1,401,605	-				-2.7
1,401,654	+				-0.3
1,401,662	-				-1.4
1,401,667	-				-0.4
1,401,688	+				+1.6
1,401,719	+				+1.7
1,401,741	-		Synpcc7942_1362	0.14	+0.9
1,401,743	+		Synpcc7942_1362	0.15	+1.2
1,401,743	+		Synpcc7942_1362	0.15	+1.1
1,401,743	+		Synpcc7942_1362	0.15	+1.6
1,401,743	+		Synpcc7942_1362	0.15	-0.1
1,401,743	+		Synpcc7942_1362	0.15	+1.0
1,401,743	+		Synpcc7942_1362	0.15	-1.1
1,401,743	+		Synpcc7942_1362	0.15	-0.6
1,401,751	-		Synpcc7942_1362	0.16	+3.6
1,401,766	+		Synpcc7942_1362	0.19	-0.5
1,401,779	-		Synpcc7942_1362	0.22	-0.9
1,401,786	+		Synpcc7942_1362	0.23	+0.6
1,401,829	+		Synpcc7942_1362	0.32	-0.1
1,401,837	-		Synpcc7942_1362	0.34	+1.5
1,401,837	-		Synpcc7942_1362	0.34	-0.1
1,401,862	+		Synpcc7942_1362	0.39	+1.1
1,401,862	+		Synpcc7942_1362	0.39	+0.9
1,401,878	-		Synpcc7942_1362	0.42	+1.6
1,401,890	-		Synpcc7942_1362	0.45	-1.0
1,401,901	-		Synpcc7942_1362	0.47	+0.2
1,401,901	-		Synpcc7942_1362	0.47	+0.5
1,401,927	+		Synpcc7942_1362	0.52	+1.5
1,401,940	-		Synpcc7942_1362	0.55	+1.7
1,401,950	+		Synpcc7942_1362	0.57	+0.5
1,401,956	+		Synpcc7942_1362	0.58	+1.5
1,402,002	-		Synpcc7942_1362	0.68	+2.3
1,402,057	+		Synpcc7942_1362	0.79	-1.9
1,402,059	+		Synpcc7942_1362	0.80	-0.1
1,402,074	-		Synpcc7942_1362	0.83	+0.8
1,402,090	-		Synpcc7942_1362	0.86	-3.4
1,402,104	+		Synpcc7942_1362	0.89	-0.6
1,402,150	+				+0.5
1,402,150	+				+2.7
1,402,150	+				+1.2
1,402,172	+				+2.2
1,402,172	+				-0.1
1,402,175	-				+0.6
1,402,196	+				-1.1
1,402,197	-				-0.6
1,402,204	-				-2.1
1,402,208	+				+1.3
1,402,209	+				-0.1
1,402,209	+				-0.9
1,402,210	+				+1.1
1,402,216	-				+0.5
1,402,216	-				+1.5
1,402,217	-				+2.1
1,402,217	-				-0.0
1,402,217	-				-1.6
1,402,217	-				+0.5
1,402,279	-				-0.1
1,402,290	-				+0.7
1,402,295	-				-0.7
1,402,324	-				-2.4
1,402,349	-				-0.2
1,402,376	+				+1.9
1,402,377	-				-1.7
1,402,387	+		Synpcc7942_1363	0.12	+1.9
1,402,425	-		Synpcc7942_1363	0.25	+1.3
1,402,443	-		Synpcc7942_1363	0.31	-2.8
1,402,443	-		Synpcc7942_1363	0.31	+0.7
1,402,453	-		Synpcc7942_1363	0.35	-0.1
1,402,497	+		Synpcc7942_1363	0.50	+0.4
1,402,505	-		Synpcc7942_1363	0.53	+0.9
1,402,516	+		Synpcc7942_1363	0.57	-0.7
1,402,523	+		Synpcc7942_1363	0.59	-1.7
1,402,578	+		Synpcc7942_1363	0.78	+1.1
1,402,604	+				+0.3
1,402,614	+				+1.1
1,402,622	-				+1.7
1,402,622	-				-0.5
1,402,622	-				-2.3
1,402,622	-				-2.2
1,402,643	+				-0.1
1,402,656	+				-0.3
1,402,669	-				-0.4
1,402,730	+		Synpcc7942_1364	0.10	+0.7
1,402,730	+		Synpcc7942_1364	0.10	-0.7
1,402,731	+		Synpcc7942_1364	0.11	-2.1
1,402,749	-				-2.4
1,402,760	-		Synpcc7942_1364	0.18	+1.7
1,402,769	+		Synpcc7942_1364	0.20	+0.6
1,402,777	+		Synpcc7942_1364	0.22	+0.9
1,402,784	+		Synpcc7942_1364	0.23	+0.9
1,402,803	-		Synpcc7942_1364	0.28	+0.6
1,402,878	+		Synpcc7942_1364	0.46	-0.2
1,402,879	-		Synpcc7942_1364	0.46	+0.5
1,402,915	+		Synpcc7942_1364	0.55	-0.1
1,402,915	+		Synpcc7942_1364	0.55	+2.6
1,402,922	+		Synpcc7942_1364	0.56	-2.1
1,402,963	-		Synpcc7942_1364	0.66	-3.7
1,402,963	-		Synpcc7942_1364	0.66	-0.1
1,403,000	-		Synpcc7942_1364	0.75	+1.3
1,403,013	+		Synpcc7942_1364	0.78	+1.4
1,403,013	+		Synpcc7942_1364	0.78	+0.3
1,403,118	+				-0.1
1,403,126	-				+0.9