Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1339

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,372,780	+				+1.1
1,372,806	-				+0.1
1,372,807	-				-2.4
1,372,809	+				-1.1
1,372,817	-				-0.1
1,372,837	+				+0.9
1,372,871	+				+0.9
1,372,886	+				+0.6
1,372,894	-				-0.1
1,372,928	-				-0.1
1,372,947	+		Synpcc7942_1338	0.11	+0.3
1,372,948	-		Synpcc7942_1338	0.11	-0.4
1,372,952	+		Synpcc7942_1338	0.11	-2.3
1,372,955	-		Synpcc7942_1338	0.12	+0.3
1,372,957	+		Synpcc7942_1338	0.12	+0.6
1,372,965	-		Synpcc7942_1338	0.13	-3.3
1,373,014	+		Synpcc7942_1338	0.19	-0.0
1,373,014	+		Synpcc7942_1338	0.19	+0.9
1,373,014	+		Synpcc7942_1338	0.19	+0.4
1,373,062	+		Synpcc7942_1338	0.25	-2.1
1,373,067	+		Synpcc7942_1338	0.26	+0.1
1,373,075	-		Synpcc7942_1338	0.27	+0.5
1,373,107	-		Synpcc7942_1338	0.31	-2.1
1,373,135	-		Synpcc7942_1338	0.35	+1.3
1,373,581	-				-0.1
1,373,736	-				-1.7
1,373,756	+				+1.8
1,373,777	+				-0.1
1,373,777	+				-4.6
1,373,777	+				+2.6
1,373,777	+				+0.4
1,373,777	+				+0.6
1,373,782	+				-0.6
1,373,785	-				+0.9
1,373,785	-				+1.5
1,373,785	-				-1.3
1,373,785	-				-0.9
1,373,785	-				-1.0
1,373,785	-				+4.4
1,373,785	-				+1.9
1,373,785	-				+2.1
1,373,785	-				+0.1
1,373,790	-				+2.0
1,373,828	+		Synpcc7942_1339	0.25	-0.1
1,373,828	+		Synpcc7942_1339	0.25	+1.0
1,373,867	-		Synpcc7942_1339	0.45	-3.4
1,373,869	+		Synpcc7942_1339	0.46	-0.3
1,373,871	+		Synpcc7942_1339	0.47	+0.3
1,373,871	+		Synpcc7942_1339	0.47	+1.7
1,373,876	+		Synpcc7942_1339	0.50	+3.0
1,373,879	-		Synpcc7942_1339	0.51	+1.2
1,373,882	+		Synpcc7942_1339	0.53	+0.4
1,373,901	-		Synpcc7942_1339	0.63	-1.4
1,373,922	+		Synpcc7942_1339	0.73	+2.4
1,373,935	-		Synpcc7942_1339	0.80	-0.7
1,373,935	-		Synpcc7942_1339	0.80	+1.1
1,373,937	+		Synpcc7942_1339	0.81	+0.9
1,373,963	+				+0.1
1,374,023	-				-1.7
1,374,029	-				-0.4
1,374,029	-				-0.9
1,374,035	+				-0.4
1,374,035	+				-1.1
1,374,037	-				-1.1
1,374,088	-				-0.3
1,374,635	+				-0.4
1,374,635	+				+0.1
1,374,665	+				-0.4
1,374,767	+				+0.9
1,374,786	-				-1.7
1,374,846	+				+1.3
1,374,848	+				-2.9
1,374,854	-				+0.8
1,374,871	-		Synpcc7942_1341	0.11	+0.5
1,374,877	-		Synpcc7942_1341	0.11	+2.2
1,374,891	+		Synpcc7942_1341	0.12	-1.1
1,374,899	-		Synpcc7942_1341	0.13	+1.9
1,374,899	-				-2.1
1,374,899	-		Synpcc7942_1341	0.13	+0.5
1,374,923	+		Synpcc7942_1341	0.15	+1.3
1,374,928	+		Synpcc7942_1341	0.16	-0.0
1,374,931	-		Synpcc7942_1341	0.16	-0.1
1,374,960	+		Synpcc7942_1341	0.19	-1.1
1,374,963	+		Synpcc7942_1341	0.19	+0.7
1,374,965	+		Synpcc7942_1341	0.19	-2.1
1,374,972	+		Synpcc7942_1341	0.20	-1.1
1,374,972	+		Synpcc7942_1341	0.20	+1.2
1,374,972	+		Synpcc7942_1341	0.20	+1.5
1,374,972	+		Synpcc7942_1341	0.20	-2.9