Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1267

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,289,998	-		Synpcc7942_1265	0.63	-0.8
1,290,000	+		Synpcc7942_1265	0.64	-0.9
1,290,045	-		Synpcc7942_1265	0.70	-1.1
1,290,050	-		Synpcc7942_1265	0.71	-0.1
1,290,055	-		Synpcc7942_1265	0.71	-0.1
1,290,125	+		Synpcc7942_1265	0.81	-0.5
1,290,125	+		Synpcc7942_1265	0.81	+1.0
1,290,125	+		Synpcc7942_1265	0.81	+1.0
1,290,126	-		Synpcc7942_1265	0.81	-1.7
1,290,133	-		Synpcc7942_1265	0.82	+0.3
1,290,152	-		Synpcc7942_1265	0.85	+2.4
1,290,164	-		Synpcc7942_1265	0.87	+2.3
1,290,196	+				-1.7
1,290,204	-				-0.1
1,290,211	+				+0.6
1,290,257	-				+1.1
1,290,311	+				-1.7
1,290,320	-				-3.0
1,290,325	+				+0.4
1,290,358	+				-1.6
1,290,358	+				+1.1
1,290,358	+				-1.1
1,290,358	+				+1.6
1,290,358	+				+0.9
1,290,358	+				-1.1
1,290,358	+				+0.4
1,290,363	+				-1.1
1,290,366	-				-1.1
1,290,366	-				+2.4
1,290,366	-				-3.1
1,290,366	-				-1.7
1,290,366	-				-1.1
1,290,366	-				+0.4
1,290,366	-				+0.4
1,290,366	-				-1.1
1,290,366	-				+0.6
1,290,366	-				-2.5
1,290,366	-				-1.7
1,290,375	+				+1.0
1,290,411	-				-0.4
1,290,447	-	rdgB	Synpcc7942_1266	0.15	-2.3
1,290,457	+	rdgB	Synpcc7942_1266	0.16	-0.0
1,290,465	-	rdgB	Synpcc7942_1266	0.18	-0.4
1,290,467	+	rdgB	Synpcc7942_1266	0.18	-0.0
1,290,475	-	rdgB	Synpcc7942_1266	0.19	-0.3
1,290,480	-	rdgB	Synpcc7942_1266	0.20	+0.1
1,290,498	+	rdgB	Synpcc7942_1266	0.23	-1.3
1,290,500	+	rdgB	Synpcc7942_1266	0.24	+0.5
1,290,531	+	rdgB	Synpcc7942_1266	0.29	+1.8
1,290,531	+	rdgB	Synpcc7942_1266	0.29	-1.4
1,290,538	+	rdgB	Synpcc7942_1266	0.30	+0.4
1,290,539	-	rdgB	Synpcc7942_1266	0.30	+3.5
1,290,548	-	rdgB	Synpcc7942_1266	0.32	-0.1
1,290,588	+				+0.9
1,290,588	+	rdgB	Synpcc7942_1266	0.38	+0.4
1,290,588	+	rdgB	Synpcc7942_1266	0.38	+1.3
1,290,596	-	rdgB	Synpcc7942_1266	0.40	-2.1
1,290,596	-	rdgB	Synpcc7942_1266	0.40	+1.1
1,290,618	+	rdgB	Synpcc7942_1266	0.43	-0.5
1,290,618	+	rdgB	Synpcc7942_1266	0.43	-1.8
1,290,618	+	rdgB	Synpcc7942_1266	0.43	+3.6
1,290,626	-	rdgB	Synpcc7942_1266	0.45	+1.3
1,290,631	-	rdgB	Synpcc7942_1266	0.46	+0.6
1,290,638	+	rdgB	Synpcc7942_1266	0.47	-1.7
1,290,693	+	rdgB	Synpcc7942_1266	0.56	+1.0
1,290,732	-	rdgB	Synpcc7942_1266	0.63	-1.0
1,290,734	-	rdgB	Synpcc7942_1266	0.63	+0.3
1,290,742	-	rdgB	Synpcc7942_1266	0.64	+0.3
1,290,742	-	rdgB	Synpcc7942_1266	0.64	-0.9
1,290,820	+	rdgB	Synpcc7942_1266	0.77	-0.2
1,290,825	+	rdgB	Synpcc7942_1266	0.78	-1.0
1,290,859	+	rdgB	Synpcc7942_1266	0.84	-0.6
1,290,881	-	rdgB	Synpcc7942_1266	0.88	-0.8
1,290,882	-	rdgB	Synpcc7942_1266	0.88	+0.7
1,290,948	-				+1.0
1,290,960	+				-4.1
1,290,965	+				+1.0
1,290,968	-				-0.1
1,290,973	-				-2.5
1,290,992	+				-2.1
1,290,992	+				-0.6
1,291,010	-				-1.1
1,291,020	-				-0.9
1,291,026	+				-3.4
1,291,041	+		Synpcc7942_1267	0.12	-2.1
1,291,042	-		Synpcc7942_1267	0.12	-1.4
1,291,043	+		Synpcc7942_1267	0.12	-2.5
1,291,043	+		Synpcc7942_1267	0.12	-2.5
1,291,051	-		Synpcc7942_1267	0.13	-2.1
1,291,051	-		Synpcc7942_1267	0.13	-2.1
1,291,056	-		Synpcc7942_1267	0.14	-1.5
1,291,061	-		Synpcc7942_1267	0.14	-0.1
1,291,075	+		Synpcc7942_1267	0.16	-3.1
1,291,075	+		Synpcc7942_1267	0.16	-1.7
1,291,075	+		Synpcc7942_1267	0.16	-3.3
1,291,080	+		Synpcc7942_1267	0.17	-3.9
1,291,080	+		Synpcc7942_1267	0.17	-1.7
1,291,083	-		Synpcc7942_1267	0.17	-3.7
1,291,102	-		Synpcc7942_1267	0.19	-1.5
1,291,102	-		Synpcc7942_1267	0.19	-0.1
1,291,116	-		Synpcc7942_1267	0.21	-3.6
1,291,165	-		Synpcc7942_1267	0.28	-2.5
1,291,167	+		Synpcc7942_1267	0.28	+2.2
1,291,211	+		Synpcc7942_1267	0.33	-0.1
1,291,224	+		Synpcc7942_1267	0.35	-4.1
1,291,224	+		Synpcc7942_1267	0.35	-3.1
1,291,232	-		Synpcc7942_1267	0.36	-3.6
1,291,250	+		Synpcc7942_1267	0.38	-3.3
1,291,267	+		Synpcc7942_1267	0.41	-1.7
1,291,272	+		Synpcc7942_1267	0.41	-1.1
1,291,361	+		Synpcc7942_1267	0.53	-1.1
1,291,372	+		Synpcc7942_1267	0.54	-1.7
1,291,396	+		Synpcc7942_1267	0.57	-3.5
1,291,406	-		Synpcc7942_1267	0.58	-2.1
1,291,406	-		Synpcc7942_1267	0.58	-1.0
1,291,406	-		Synpcc7942_1267	0.58	+1.3
1,291,427	-		Synpcc7942_1267	0.61	-1.1
1,291,427	-		Synpcc7942_1267	0.61	-1.7
1,291,442	+		Synpcc7942_1267	0.63	-0.1
1,291,450	-		Synpcc7942_1267	0.64	-2.5
1,291,494	-		Synpcc7942_1267	0.70	-1.4
1,291,532	-		Synpcc7942_1267	0.75	-3.1
1,291,534	+		Synpcc7942_1267	0.75	-2.1
1,291,593	+		Synpcc7942_1267	0.82	-2.6
1,291,631	+		Synpcc7942_1267	0.87	-2.1
1,291,639	+		Synpcc7942_1267	0.88	-3.2
1,291,639	+		Synpcc7942_1267	0.88	-0.1
1,291,639	+		Synpcc7942_1267	0.88	-3.0
1,291,639	+		Synpcc7942_1267	0.88	-0.9
1,291,647	-		Synpcc7942_1267	0.89	-1.4
1,291,660	+				-2.0
1,291,700	+				+0.6
1,291,700	+				+0.5
1,291,700	+				-0.1
1,291,727	-				-0.1
1,291,733	-				-0.3
1,291,744	+				-2.5
1,291,744	+				+0.4
1,291,747	+				+2.2
1,291,747	-				+0.6
1,291,757	-				-1.5
1,291,781	-				+0.6
1,291,786	-				-2.5