Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1221

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,241,480	+				-1.1
1,241,480	+				-1.1
1,241,488	-				+1.1
1,241,491	-				+0.9
1,242,306	+	rpl27	Synpcc7942_1220	0.90	-3.1
1,242,366	+				-1.1
1,242,380	-				-0.1
1,242,513	+	cheY	Synpcc7942_1221	0.15	+2.0
1,242,556	+	cheY	Synpcc7942_1221	0.27	-0.3
1,242,563	-	cheY	Synpcc7942_1221	0.29	-1.1
1,242,716	+	cheY	Synpcc7942_1221	0.69	+0.8
1,242,795	-				+1.0
1,242,802	-				-0.1
1,242,814	-				-0.1
1,242,851	-				-0.7
1,242,862	-				+1.1
1,242,886	-				-0.8
1,242,904	+				-0.5
1,242,904	+				+1.2
1,242,912	-				-2.4
1,242,912	-				+1.9
1,242,929	+				+0.4
1,242,937	+				-0.8
1,242,973	+				-0.1
1,242,973	+				+2.8
1,242,973	+				-1.7
1,242,973	+				-0.3
1,242,973	+				-1.7
1,242,973	+				-1.1
1,242,973	+				-0.7
1,242,973	+				-1.4
1,242,981	-				-1.7
1,242,981	-				+0.7
1,242,981	-				+0.4
1,242,981	-				-1.3
1,242,981	-				+2.0
1,242,981	-				+0.5
1,242,981	-				+0.5
1,242,999	-				-1.1
1,243,008	-				-1.1
1,243,032	-	truB	Synpcc7942_1222	0.12	+2.0
1,243,092	+	truB	Synpcc7942_1222	0.19	-0.5
1,243,185	+	truB	Synpcc7942_1222	0.29	+0.1
1,243,288	-	truB	Synpcc7942_1222	0.41	+2.4
1,243,291	-	truB	Synpcc7942_1222	0.41	+1.5
1,243,342	+	truB	Synpcc7942_1222	0.47	+1.5
1,243,345	-	truB	Synpcc7942_1222	0.47	-0.5
1,243,355	-	truB	Synpcc7942_1222	0.49	+0.1
1,243,373	-	truB	Synpcc7942_1222	0.51	+1.4
1,243,436	-	truB	Synpcc7942_1222	0.58	-0.1
1,243,462	+	truB	Synpcc7942_1222	0.61	-2.1
1,243,470	+	truB	Synpcc7942_1222	0.62	-0.4
1,243,470	+	truB	Synpcc7942_1222	0.62	-0.1
1,243,470	+	truB	Synpcc7942_1222	0.62	+1.0
1,243,470	+	truB	Synpcc7942_1222	0.62	-1.7
1,243,478	-	truB	Synpcc7942_1222	0.62	+1.3
1,243,499	+	truB	Synpcc7942_1222	0.65	+0.5
1,243,507	-	truB	Synpcc7942_1222	0.66	-1.2
1,243,515	-	truB	Synpcc7942_1222	0.67	+0.4
1,243,532	+	truB	Synpcc7942_1222	0.69	+2.2
1,243,532	+	truB	Synpcc7942_1222	0.69	-1.1
1,243,532	-				+0.5
1,243,540	-	truB	Synpcc7942_1222	0.69	-1.3
1,243,556	-	truB	Synpcc7942_1222	0.71	-0.1
1,243,567	-	truB	Synpcc7942_1222	0.73	+0.7
1,243,598	-	truB	Synpcc7942_1222	0.76	+1.7
1,243,598	-	truB	Synpcc7942_1222	0.76	-1.1
1,243,638	-	truB	Synpcc7942_1222	0.81	-1.4
1,243,670	+	truB	Synpcc7942_1222	0.84	+0.7
1,243,674	+	truB	Synpcc7942_1222	0.85	+2.3
1,243,704	-	truB	Synpcc7942_1222	0.88	-0.1
1,243,706	+	truB	Synpcc7942_1222	0.88	+1.7
1,243,706	+	truB	Synpcc7942_1222	0.88	-0.9
1,243,719	-	truB	Synpcc7942_1222	0.90	-2.4
1,243,743	+				+3.3
1,243,751	-				+1.1
1,243,751	-				-0.6
1,243,774	-				+1.0
1,243,776	+				+0.8
1,243,782	+				+1.9
1,243,812	-				-1.7