Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1152

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,177,466	+				+0.4
1,177,480	-				-0.1
1,177,514	-				+0.6
1,177,529	-				-0.3
1,177,531	-				-2.1
1,177,546	+				+0.5
1,177,550	+				+0.1
1,177,580	+				+2.3
1,177,589	-				+1.7
1,177,604	-				-1.1
1,177,612	+				-1.4
1,177,617	-				-0.1
1,177,622	-				-1.2
1,177,647	-				-3.6
1,177,668	+				+2.3
1,177,676	-				+0.2
1,177,676	-				-3.3
1,177,676	-				+0.9
1,177,676	-				-2.1
1,177,676	-				-1.7
1,177,681	-				-1.0
1,177,681	-				-2.7
1,177,688	-				-1.0
1,177,695	-				+1.3
1,177,713	-				-1.3
1,177,713	-				-1.5
1,177,714	-				-3.3
1,177,714	-				-2.1
1,177,728	+				-1.4
1,177,728	-				-0.5
1,177,729	-				-1.8
1,177,751	-				-2.9
1,177,761	-				-0.1
1,177,761	-				-1.9
1,177,765	+				-1.5
1,177,787	+				-0.1
1,177,833	-		Synpcc7942_1152	0.16	-3.0
1,177,838	+		Synpcc7942_1152	0.17	-3.1
1,177,891	+		Synpcc7942_1152	0.22	-2.3
1,177,891	+		Synpcc7942_1152	0.22	+0.9
1,177,914	-		Synpcc7942_1152	0.24	-0.1
1,177,915	-		Synpcc7942_1152	0.24	-0.9
1,177,928	-		Synpcc7942_1152	0.26	-1.7
1,177,955	-		Synpcc7942_1152	0.28	-0.4
1,177,958	+		Synpcc7942_1152	0.29	-1.6
1,177,990	-		Synpcc7942_1152	0.32	-0.7
1,178,039	+		Synpcc7942_1152	0.37	-2.4
1,178,045	-		Synpcc7942_1152	0.37	-0.7
1,178,054	+		Synpcc7942_1152	0.38	-0.7
1,178,054	+		Synpcc7942_1152	0.38	+1.5
1,178,120	+		Synpcc7942_1152	0.45	-4.2
1,178,147	-		Synpcc7942_1152	0.47	-2.1
1,178,147	-		Synpcc7942_1152	0.47	-0.5
1,178,216	+		Synpcc7942_1152	0.54	-2.0
1,178,216	+		Synpcc7942_1152	0.54	-2.1
1,178,216	+		Synpcc7942_1152	0.54	-2.1
1,178,262	-		Synpcc7942_1152	0.59	-1.8
1,178,312	-		Synpcc7942_1152	0.64	-0.8
1,178,319	+		Synpcc7942_1152	0.64	-2.1
1,178,338	+		Synpcc7942_1152	0.66	-1.8
1,178,352	+		Synpcc7942_1152	0.68	-1.9
1,178,361	-		Synpcc7942_1152	0.69	-1.6
1,178,361	-		Synpcc7942_1152	0.69	-2.3
1,178,361	-		Synpcc7942_1152	0.69	-0.2
1,178,363	+		Synpcc7942_1152	0.69	+0.2
1,178,381	+		Synpcc7942_1152	0.71	-1.1
1,178,381	+		Synpcc7942_1152	0.71	-2.1
1,178,381	+		Synpcc7942_1152	0.71	-2.9
1,178,381	+				+1.5
1,178,382	-		Synpcc7942_1152	0.71	-1.7
1,178,389	-		Synpcc7942_1152	0.71	-2.4
1,178,389	-		Synpcc7942_1152	0.71	-0.1
1,178,389	-		Synpcc7942_1152	0.71	-1.4
1,178,389	-		Synpcc7942_1152	0.71	-1.6
1,178,405	+		Synpcc7942_1152	0.73	-1.5
1,178,432	+		Synpcc7942_1152	0.76	-2.4
1,178,482	+		Synpcc7942_1152	0.81	+0.1
1,178,498	+		Synpcc7942_1152	0.82	-3.3
1,178,506	-		Synpcc7942_1152	0.83	-2.1
1,178,599	-				-0.1
1,178,628	-				-2.7
1,178,629	-				-1.2
1,178,633	+				-1.7
1,178,651	-				-2.7
1,178,701	+				-0.1
1,178,701	+				-2.4
1,178,709	-				-2.1
1,178,709	-				-2.1
1,178,740	-				-0.3
1,178,742	-				-0.8
1,178,755	-				-1.7
1,178,795	+				+0.5
1,178,834	+				-1.7
1,178,834	+				-2.7
1,178,834	+				+0.9
1,178,834	+				-2.1
1,178,842	-				-4.4
1,178,842	-				-3.5
1,178,842	-				-0.9
1,178,842	-				-1.7
1,178,842	-				-3.0
1,178,868	-				-2.9
1,178,868	-				-1.6
1,178,895	+				-0.4
1,178,907	-				-2.1
1,178,909	-				+0.6
1,179,072	+				+2.1
1,179,087	+				-3.6
1,179,121	+				+0.2
1,179,137	+				+1.8
1,179,159	+				+1.8
1,179,167	-				-2.2
1,179,167	-				+1.6
1,179,167	-				-2.0
1,179,183	+				+1.6
1,179,183	+				+0.1
1,179,183	+				+1.7
1,179,191	-				+3.5
1,179,191	-				+0.9
1,179,191	-				+2.4
1,179,191	-				+1.9
1,179,191	-				-0.1
1,179,191	-				-1.4
1,179,208	-				-0.4
1,179,217	+				-0.1
1,179,218	+				-0.8
1,179,218	+				+1.4
1,179,218	+				+0.3
1,179,256	+				-0.1
1,179,283	+				+1.6
1,179,283	+				+1.1
1,179,351	-				-1.1
1,179,353	+				+0.1
1,179,358	+				+0.6
1,179,361	-				-3.3
1,179,361	-				-1.1
1,179,377	+				+0.4
1,179,379	+				-1.1
1,179,385	-				-1.1
1,179,385	-				+0.7
1,179,406	-				+0.5
1,179,443	-				+0.4
1,179,446	+				-1.7
1,179,455	-				+1.2
1,179,455	-				-0.7
1,179,456	+				-1.1
1,179,461	+				-2.3
1,179,464	+				-2.4
1,179,474	-				-2.7
1,179,477	-				+1.5
1,179,480	+	digE	Synpcc7942_1153	0.10	+0.0
1,179,520	-	digE	Synpcc7942_1153	0.12	+0.6
1,179,525	-	digE	Synpcc7942_1153	0.12	-0.6
1,179,530	-	digE	Synpcc7942_1153	0.13	-2.9
1,179,545	+	digE	Synpcc7942_1153	0.14	-2.4
1,179,557	+	digE	Synpcc7942_1153	0.14	+0.3
1,179,557	-	digE	Synpcc7942_1153	0.14	+0.6
1,179,594	+	digE	Synpcc7942_1153	0.16	-0.1
1,179,594	+	digE	Synpcc7942_1153	0.16	-2.1
1,179,610	+	digE	Synpcc7942_1153	0.17	-3.3
1,179,618	-	digE	Synpcc7942_1153	0.18	-2.4
1,179,618	-	digE	Synpcc7942_1153	0.18	-0.1
1,179,618	-	digE	Synpcc7942_1153	0.18	+0.5
1,179,629	-	digE	Synpcc7942_1153	0.18	-0.7
1,179,646	-	digE	Synpcc7942_1153	0.19	-2.1
1,179,653	-	digE	Synpcc7942_1153	0.19	+0.5
1,179,671	+	digE	Synpcc7942_1153	0.20	+1.5
1,179,671	-	digE	Synpcc7942_1153	0.20	-0.4