Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1016

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,029,957	+		Synpcc7942_1015	0.61	+1.3
1,029,975	-		Synpcc7942_1015	0.62	-0.3
1,030,020	-		Synpcc7942_1015	0.64	-0.9
1,030,042	-		Synpcc7942_1015	0.64	+0.4
1,030,051	+		Synpcc7942_1015	0.65	-0.7
1,030,069	-		Synpcc7942_1015	0.66	+1.7
1,030,069	-		Synpcc7942_1015	0.66	-1.7
1,030,084	-		Synpcc7942_1015	0.66	+0.7
1,030,084	-				-1.1
1,030,094	-		Synpcc7942_1015	0.67	+0.1
1,030,150	-		Synpcc7942_1015	0.69	-0.1
1,030,161	+		Synpcc7942_1015	0.69	+0.2
1,030,195	+		Synpcc7942_1015	0.71	+0.2
1,030,256	-		Synpcc7942_1015	0.73	+0.4
1,030,273	-		Synpcc7942_1015	0.74	+1.5
1,030,322	-		Synpcc7942_1015	0.76	+1.4
1,030,322	-		Synpcc7942_1015	0.76	+0.7
1,030,388	-				-1.1
1,030,449	-		Synpcc7942_1015	0.81	+0.2
1,030,510	+		Synpcc7942_1015	0.83	+1.5
1,030,513	-		Synpcc7942_1015	0.83	-0.6
1,030,518	-		Synpcc7942_1015	0.83	+0.7
1,030,537	+		Synpcc7942_1015	0.84	+1.4
1,030,552	+		Synpcc7942_1015	0.85	+1.8
1,030,558	-		Synpcc7942_1015	0.85	-0.7
1,030,637	-		Synpcc7942_1015	0.88	-1.7
1,030,673	-				-1.1
1,030,684	-		Synpcc7942_1015	0.90	+1.6
1,030,686	+				-1.7
1,030,731	+				+1.6
1,030,744	-				+3.2
1,030,749	-				-1.7
1,030,774	-				+1.3
1,030,781	+				-3.1
1,030,784	-				+0.1
1,030,789	-				+0.3
1,030,789	-				-0.1
1,030,825	+				-0.5
1,030,825	+				+1.6
1,030,825	+				-2.1
1,030,825	+				+2.0
1,030,833	-				+1.1
1,030,833	-				+0.5
1,030,833	-				+0.8
1,030,837	+				-3.3
1,030,841	+				+0.4
1,030,861	+				-0.2
1,030,878	-				+2.4
1,030,878	-				+0.1
1,030,881	+				-0.6
1,030,881	+				+1.0
1,030,903	-				+2.5
1,030,941	+				+0.3
1,030,950	+				+2.2
1,030,958	-				-1.1
1,030,960	+				-0.8
1,030,963	-				-0.9
1,030,965	+				+0.8
1,030,965	+				-1.1
1,030,965	+				-0.1
1,030,965	+				+1.1
1,030,968	-				+0.0
1,030,968	-				+1.3
1,030,972	+				+2.6
1,030,973	-				+0.5
1,030,973	-				+1.2
1,030,973	-				+0.6
1,030,973	-				+1.7
1,030,975	-				-0.7
1,030,980	-				+0.9
1,030,999	-				+3.7
1,031,000	-				+0.9
1,031,031	+	cheW	Synpcc7942_1016	0.16	+1.1
1,031,065	-	cheW	Synpcc7942_1016	0.23	+0.5
1,031,075	-	cheW	Synpcc7942_1016	0.25	+0.8
1,031,098	+	cheW	Synpcc7942_1016	0.30	+1.4
1,031,098	+	cheW	Synpcc7942_1016	0.30	-1.3
1,031,136	+	cheW	Synpcc7942_1016	0.38	+0.9
1,031,144	-	cheW	Synpcc7942_1016	0.40	+2.1
1,031,144	-	cheW	Synpcc7942_1016	0.40	+1.1
1,031,166	-	cheW	Synpcc7942_1016	0.44	+1.6
1,031,209	+	cheW	Synpcc7942_1016	0.53	+2.8
1,031,266	+	cheW	Synpcc7942_1016	0.65	+1.3
1,031,274	-	cheW	Synpcc7942_1016	0.66	+1.5
1,031,292	-	cheW	Synpcc7942_1016	0.70	+1.7
1,031,309	-	cheW	Synpcc7942_1016	0.74	+1.0
1,031,431	+				+0.3
1,031,431	+				+0.1
1,031,453	+				+2.1
1,031,454	+				+0.2
1,031,461	-				-1.1
1,031,471	+				+2.5
1,031,483	-				-0.0
1,031,484	+				+0.7
1,031,540	-				-0.1
1,031,544	+				-0.7
1,031,571	-				-2.1
1,031,574	-				+1.5
1,031,574	-				-0.5
1,031,580	+				-2.1
1,031,602	+				+0.2
1,031,611	+				+0.6
1,031,618	-				+0.7
1,031,623	+				-0.1
1,031,633	+				+2.2
1,031,638	+				+0.1
1,031,653	+				+0.0
1,031,700	-				+0.8
1,031,708	+				+2.0
1,031,738	-				-1.9
1,031,775	+		Synpcc7942_1017	0.10	-1.1
1,031,775	-		Synpcc7942_1017	0.10	-1.1
1,031,776	+		Synpcc7942_1017	0.10	-0.5
1,031,793	-		Synpcc7942_1017	0.13	-0.8
1,031,796	+		Synpcc7942_1017	0.13	-1.7
1,031,819	-		Synpcc7942_1017	0.16	-1.1
1,031,832	-		Synpcc7942_1017	0.18	+0.1
1,031,832	-		Synpcc7942_1017	0.18	+1.5
1,031,851	+		Synpcc7942_1017	0.20	+1.2
1,031,861	+		Synpcc7942_1017	0.22	+1.5
1,031,861	+		Synpcc7942_1017	0.22	+1.1
1,031,868	+				-0.1
1,031,876	-		Synpcc7942_1017	0.23	+0.2
1,031,878	+		Synpcc7942_1017	0.24	+1.9
1,031,886	-		Synpcc7942_1017	0.25	+0.7
1,031,892	+		Synpcc7942_1017	0.26	-0.5
1,031,897	+		Synpcc7942_1017	0.26	+0.6
1,031,899	+		Synpcc7942_1017	0.27	-1.0
1,031,954	+		Synpcc7942_1017	0.34	+0.4
1,031,985	+		Synpcc7942_1017	0.38	-3.5
1,031,997	+		Synpcc7942_1017	0.39	-1.1
1,032,005	-		Synpcc7942_1017	0.40	+1.2
1,032,035	-		Synpcc7942_1017	0.44	+0.8
1,032,067	+		Synpcc7942_1017	0.49	-1.1
1,032,068	+		Synpcc7942_1017	0.49	-0.6
1,032,117	-		Synpcc7942_1017	0.55	-0.7
1,032,130	+		Synpcc7942_1017	0.57	-1.1
1,032,179	+		Synpcc7942_1017	0.63	+0.2
1,032,180	+		Synpcc7942_1017	0.63	+0.7
1,032,180	+		Synpcc7942_1017	0.63	-1.5
1,032,180	+		Synpcc7942_1017	0.63	+0.8
1,032,188	-		Synpcc7942_1017	0.64	+0.4
1,032,202	+		Synpcc7942_1017	0.66	+2.7
1,032,202	+		Synpcc7942_1017	0.66	+0.2
1,032,270	-		Synpcc7942_1017	0.75	-0.9