Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0123

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
122,952	+		Synpcc7942_0122	0.71	-2.4
123,037	+		Synpcc7942_0122	0.76	+0.1
123,045	-		Synpcc7942_0122	0.77	-1.8
123,047	-		Synpcc7942_0122	0.77	+0.4
123,058	+		Synpcc7942_0122	0.78	-0.7
123,164	+		Synpcc7942_0122	0.84	-3.7
123,174	+		Synpcc7942_0122	0.85	+0.8
123,187	+		Synpcc7942_0122	0.86	-2.1
123,195	-		Synpcc7942_0122	0.86	+0.9
123,195	-		Synpcc7942_0122	0.86	+0.2
123,195	-		Synpcc7942_0122	0.86	-0.6
123,195	-		Synpcc7942_0122	0.86	+0.3
123,337	+				+0.7
123,378	-				-0.1
123,471	-				+0.1
123,724	+				+0.2
123,748	-				-2.1
123,791	-				-0.2
123,798	-				-0.7
123,857	-		Synpcc7942_0123	0.54	+1.7
123,886	+		Synpcc7942_0123	0.87	+1.2
123,886	+		Synpcc7942_0123	0.87	+0.3
123,886	+		Synpcc7942_0123	0.87	+0.4
123,894	-				+3.1
123,924	+				-0.1
123,932	-				-2.4
123,942	-				-0.1
123,962	+	tRNA-Cys	Synpcc7942_R0027	0.30	-2.4
123,977	+	tRNA-Cys	Synpcc7942_R0027	0.50	-2.0
124,024	-				+0.5
124,030	-				+0.9
124,067	+				-1.2
124,075	-				+0.2
124,075	-				+0.4
124,099	+				+0.5
124,100	+				-0.1
124,115	+				+0.6
124,123	-				-0.1
124,127	+				+1.1
124,142	+		Synpcc7942_0124	0.12	-2.1
124,150	+		Synpcc7942_0124	0.13	-1.1
124,160	+		Synpcc7942_0124	0.15	-0.2
124,168	-				-2.1
124,168	-		Synpcc7942_0124	0.16	+0.8
124,168	-		Synpcc7942_0124	0.16	+0.6
124,168	-		Synpcc7942_0124	0.16	+2.5
124,168	-		Synpcc7942_0124	0.16	+0.5
124,183	+		Synpcc7942_0124	0.19	-0.0
124,199	+		Synpcc7942_0124	0.21	+0.4
124,207	-		Synpcc7942_0124	0.23	+0.1
124,207	-		Synpcc7942_0124	0.23	+0.6
124,207	-		Synpcc7942_0124	0.23	-2.4
124,210	+		Synpcc7942_0124	0.23	-0.7
124,210	+		Synpcc7942_0124	0.23	+1.3
124,230	+		Synpcc7942_0124	0.27	+0.7
124,230	+		Synpcc7942_0124	0.27	-2.7
124,230	+		Synpcc7942_0124	0.27	-3.1
124,238	-		Synpcc7942_0124	0.28	-0.1
124,238	-		Synpcc7942_0124	0.28	+1.4
124,286	+		Synpcc7942_0124	0.36	-0.1
124,286	+		Synpcc7942_0124	0.36	+0.9
124,286	+		Synpcc7942_0124	0.36	-2.7
124,302	-		Synpcc7942_0124	0.39	+2.7
124,322	+		Synpcc7942_0124	0.42	-1.1
124,334	+		Synpcc7942_0124	0.44	+0.9
124,334	+		Synpcc7942_0124	0.44	+0.5
124,334	+		Synpcc7942_0124	0.44	+0.8
124,342	-		Synpcc7942_0124	0.45	+0.1
124,344	+		Synpcc7942_0124	0.46	-0.7
124,352	-		Synpcc7942_0124	0.47	+1.2
124,352	-		Synpcc7942_0124	0.47	-0.1
124,352	-		Synpcc7942_0124	0.47	-0.1
124,365	+		Synpcc7942_0124	0.49	+0.8
124,405	+		Synpcc7942_0124	0.56	-1.1
124,405	+				-0.1
124,407	+		Synpcc7942_0124	0.56	+0.6
124,407	+		Synpcc7942_0124	0.56	+0.5
124,413	-		Synpcc7942_0124	0.57	-1.7
124,417	+		Synpcc7942_0124	0.58	-0.4
124,424	+		Synpcc7942_0124	0.59	+1.7
124,425	-		Synpcc7942_0124	0.59	+1.2
124,463	+		Synpcc7942_0124	0.66	+0.6
124,471	-		Synpcc7942_0124	0.67	+0.1
124,526	-		Synpcc7942_0124	0.76	-2.4
124,528	-		Synpcc7942_0124	0.76	-0.1
124,528	-		Synpcc7942_0124	0.76	+2.0
124,536	-		Synpcc7942_0124	0.78	+0.5
124,552	+		Synpcc7942_0124	0.80	+0.0
124,560	-		Synpcc7942_0124	0.82	+0.1
124,621	+				-0.4
124,623	+				-1.4
124,623	+				-0.1
124,633	+				+1.0
124,633	+				-0.4
124,633	+				+1.2
124,640	+				-2.5
124,643	-				+0.6
124,673	-				+0.5
124,686	+				+1.1
124,696	+				-1.2
124,720	+				-0.3
124,720	-				+1.0