Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0024

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
23,281	+	cax	Synpcc7942_0023	0.21	-2.7
23,291	-	cax	Synpcc7942_0023	0.22	-0.4
23,313	+	cax	Synpcc7942_0023	0.24	+0.2
23,354	-	cax	Synpcc7942_0023	0.28	+1.0
23,366	+	cax	Synpcc7942_0023	0.29	-0.5
23,377	-	cax	Synpcc7942_0023	0.30	+1.4
23,384	+	cax	Synpcc7942_0023	0.31	+0.6
23,434	+	cax	Synpcc7942_0023	0.35	-1.4
23,438	-	cax	Synpcc7942_0023	0.36	+0.2
23,438	-	cax	Synpcc7942_0023	0.36	+3.0
23,442	-	cax	Synpcc7942_0023	0.36	-1.7
23,442	-	cax	Synpcc7942_0023	0.36	-0.1
23,494	+	cax	Synpcc7942_0023	0.41	-0.5
23,507	-	cax	Synpcc7942_0023	0.42	-0.4
23,512	+	cax	Synpcc7942_0023	0.43	-0.2
23,512	+	cax	Synpcc7942_0023	0.43	-0.4
23,512	+	cax	Synpcc7942_0023	0.43	+0.3
23,515	-	cax	Synpcc7942_0023	0.43	-0.7
23,520	-	cax	Synpcc7942_0023	0.43	-0.1
23,520	-	cax	Synpcc7942_0023	0.43	+0.8
23,520	-	cax	Synpcc7942_0023	0.43	-0.1
23,539	-	cax	Synpcc7942_0023	0.45	+0.7
23,556	-	cax	Synpcc7942_0023	0.47	+0.6
23,575	-	cax	Synpcc7942_0023	0.49	-0.1
23,582	-	cax	Synpcc7942_0023	0.49	+1.5
23,593	+	cax	Synpcc7942_0023	0.50	+0.2
23,593	+	cax	Synpcc7942_0023	0.50	-2.7
23,602	-	cax	Synpcc7942_0023	0.51	+2.1
23,606	-	cax	Synpcc7942_0023	0.52	+1.3
23,608	-	cax	Synpcc7942_0023	0.52	-0.7
23,649	+	cax	Synpcc7942_0023	0.56	+0.9
23,726	-	cax	Synpcc7942_0023	0.63	+0.9
23,730	+	cax	Synpcc7942_0023	0.63	+0.7
23,738	-	cax	Synpcc7942_0023	0.64	+2.9
23,738	-	cax	Synpcc7942_0023	0.64	-1.1
23,749	-	cax	Synpcc7942_0023	0.65	-3.1
23,759	+	cax	Synpcc7942_0023	0.66	-2.4
23,760	-	cax	Synpcc7942_0023	0.66	+0.1
23,773	+	cax	Synpcc7942_0023	0.67	-2.2
23,800	+	cax	Synpcc7942_0023	0.70	-1.1
23,826	-	cax	Synpcc7942_0023	0.72	+0.6
23,830	-	cax	Synpcc7942_0023	0.73	-1.1
23,889	+	cax	Synpcc7942_0023	0.78	-1.1
23,889	-	cax	Synpcc7942_0023	0.78	+1.5
23,892	-	cax	Synpcc7942_0023	0.78	-0.4
23,897	-	cax	Synpcc7942_0023	0.79	-0.1
23,912	+	cax	Synpcc7942_0023	0.80	-0.7
23,912	+	cax	Synpcc7942_0023	0.80	+0.8
23,922	+	cax	Synpcc7942_0023	0.81	-0.1
23,922	+	cax	Synpcc7942_0023	0.81	+3.5
23,922	+	cax	Synpcc7942_0023	0.81	+0.1
23,922	+	cax	Synpcc7942_0023	0.81	-0.7
23,922	+	cax	Synpcc7942_0023	0.81	+0.3
23,922	+	cax	Synpcc7942_0023	0.81	+1.4
23,924	+	cax	Synpcc7942_0023	0.81	+2.2
23,930	-	cax	Synpcc7942_0023	0.82	+1.0
23,930	-	cax	Synpcc7942_0023	0.82	+1.7
23,930	-	cax	Synpcc7942_0023	0.82	-2.4
23,932	-	cax	Synpcc7942_0023	0.82	+3.7
23,932	-	cax	Synpcc7942_0023	0.82	-3.1
23,957	-	cax	Synpcc7942_0023	0.85	-1.1
24,099	-				+1.3
24,131	-				+1.7
24,131	-				+1.5
24,136	+				+2.0
24,142	+				-2.1
24,150	-				-1.8
24,189	+				-1.1
24,189	+				-0.4
24,197	+				-1.2
24,205	-				-2.1
24,226	-				+0.7
24,241	+				+1.3
24,268	-				+1.9
24,284	+				+1.5
24,298	-				+1.8
24,319	+		Synpcc7942_0024	0.12	+0.6
24,319	+		Synpcc7942_0024	0.12	+1.4
24,319	+		Synpcc7942_0024	0.12	+1.3
24,319	+		Synpcc7942_0024	0.12	-0.7
24,325	+		Synpcc7942_0024	0.12	-0.7
24,327	-		Synpcc7942_0024	0.12	+3.1
24,327	-		Synpcc7942_0024	0.12	+1.2
24,327	-		Synpcc7942_0024	0.12	+1.7
24,334	-		Synpcc7942_0024	0.13	+0.4
24,338	+		Synpcc7942_0024	0.13	-0.6
24,338	+		Synpcc7942_0024	0.13	+0.7
24,340	+		Synpcc7942_0024	0.13	-0.3
24,348	-		Synpcc7942_0024	0.14	+0.5
24,377	+		Synpcc7942_0024	0.16	-1.7
24,382	+		Synpcc7942_0024	0.17	+1.6
24,385	-		Synpcc7942_0024	0.17	+0.8
24,421	+		Synpcc7942_0024	0.20	-0.3
24,429	-		Synpcc7942_0024	0.21	-0.1
24,535	-		Synpcc7942_0024	0.30	+1.2
24,542	+		Synpcc7942_0024	0.30	-0.6
24,549	-		Synpcc7942_0024	0.31	+0.2
24,550	-		Synpcc7942_0024	0.31	+1.0
24,550	-		Synpcc7942_0024	0.31	-0.2
24,554	+		Synpcc7942_0024	0.31	+2.4
24,568	-		Synpcc7942_0024	0.32	-1.2
24,587	-		Synpcc7942_0024	0.34	+1.8
24,587	-		Synpcc7942_0024	0.34	-1.4
24,588	-		Synpcc7942_0024	0.34	+1.2
24,588	-		Synpcc7942_0024	0.34	+0.5
24,594	+		Synpcc7942_0024	0.35	+1.1
24,602	-		Synpcc7942_0024	0.35	+0.1
24,602	-		Synpcc7942_0024	0.35	+1.1
24,606	+		Synpcc7942_0024	0.36	+1.0
24,629	-		Synpcc7942_0024	0.38	+0.7
24,640	+		Synpcc7942_0024	0.39	-0.0
24,640	+		Synpcc7942_0024	0.39	+0.8
24,652	+		Synpcc7942_0024	0.40	-0.6
24,652	+		Synpcc7942_0024	0.40	+0.5
24,660	-		Synpcc7942_0024	0.40	-1.9
24,682	-		Synpcc7942_0024	0.42	+1.4
24,690	-		Synpcc7942_0024	0.43	+0.8
24,706	+		Synpcc7942_0024	0.44	+0.8
24,743	+		Synpcc7942_0024	0.47	+1.5
24,750	-		Synpcc7942_0024	0.48	+2.1
24,751	-		Synpcc7942_0024	0.48	+1.6
24,781	-		Synpcc7942_0024	0.50	+0.8
24,789	+		Synpcc7942_0024	0.51	+0.9
24,795	+		Synpcc7942_0024	0.52	+0.8
24,800	+		Synpcc7942_0024	0.52	+0.9
24,803	-		Synpcc7942_0024	0.52	+0.9
24,855	+		Synpcc7942_0024	0.57	+0.8
24,855	+		Synpcc7942_0024	0.57	+0.7
24,863	-		Synpcc7942_0024	0.57	-0.1
24,890	+		Synpcc7942_0024	0.60	+1.0
24,900	-		Synpcc7942_0024	0.60	+1.6
24,962	-		Synpcc7942_0024	0.66	+0.5
24,964	+		Synpcc7942_0024	0.66	+1.0
24,972	-		Synpcc7942_0024	0.66	+1.7
24,972	-		Synpcc7942_0024	0.66	+1.1
24,988	+		Synpcc7942_0024	0.68	+0.4
25,007	+		Synpcc7942_0024	0.69	+0.1
25,032	-		Synpcc7942_0024	0.71	-0.4
25,033	-		Synpcc7942_0024	0.72	+1.6
25,054	+		Synpcc7942_0024	0.73	+0.6
25,056	+		Synpcc7942_0024	0.73	+1.1
25,056	+		Synpcc7942_0024	0.73	-0.1
25,064	-		Synpcc7942_0024	0.74	+1.1
25,064	-		Synpcc7942_0024	0.74	+0.8
25,064	-		Synpcc7942_0024	0.74	-1.1
25,081	+		Synpcc7942_0024	0.76	+1.1
25,081	+		Synpcc7942_0024	0.76	+0.4
25,081	-		Synpcc7942_0024	0.76	+0.2
25,088	+		Synpcc7942_0024	0.76	+0.7
25,088	+		Synpcc7942_0024	0.76	+0.6
25,089	-		Synpcc7942_0024	0.76	+1.3
25,093	+		Synpcc7942_0024	0.77	+0.1
25,098	+		Synpcc7942_0024	0.77	+0.1
25,101	-		Synpcc7942_0024	0.77	+1.1
25,101	-		Synpcc7942_0024	0.77	+1.2
25,124	+		Synpcc7942_0024	0.79	+1.9
25,131	-		Synpcc7942_0024	0.80	-1.6
25,131	-		Synpcc7942_0024	0.80	-0.3
25,132	-		Synpcc7942_0024	0.80	+0.1
25,137	-		Synpcc7942_0024	0.80	+1.5
25,150	+		Synpcc7942_0024	0.81	+1.8
25,150	+		Synpcc7942_0024	0.81	-0.7
25,174	-		Synpcc7942_0024	0.83	+2.0
25,194	-		Synpcc7942_0024	0.85	+1.2
25,211	-		Synpcc7942_0024	0.86	-0.1
25,226	+		Synpcc7942_0024	0.88	+0.9
25,226	+		Synpcc7942_0024	0.88	+1.4
25,226	+		Synpcc7942_0024	0.88	+0.5
25,236	-		Synpcc7942_0024	0.89	+0.7
25,237	+		Synpcc7942_0024	0.89	+0.4
25,238	+		Synpcc7942_0024	0.89	+1.1
25,246	-		Synpcc7942_0024	0.89	+0.9
25,246	-		Synpcc7942_0024	0.89	+1.6
25,246	-		Synpcc7942_0024	0.89	+0.6
25,290	+				+0.3
25,302	+				+0.2
25,309	+				+0.5
25,309	+				+2.5
25,309	+				+2.7
25,317	-				+0.6
25,317	-				+1.4
25,317	-				-0.1
25,317	-				+2.7
25,318	-				+2.1
25,328	+				+1.5
25,328	+				+0.7
25,342	+				+1.8
25,342	+				+1.5
25,350	-				+0.9
25,360	-				-1.1
25,364	+				+2.9
25,365	-				-1.0
25,372	-				-0.0
25,372	-				-0.5
25,372	-				-1.5
25,378	+				+0.3
25,386	-				-0.1
25,421	+				-1.1
25,429	-				-1.1
25,451	-				-0.5
25,477	-				-1.1
25,507	+				+1.5
25,507	+				-1.1
25,514	+				-2.7
25,531	+				-1.7
25,551	+				-1.3
25,559	-				-0.1
25,601	-		Synpcc7942_0025	0.11	+1.6
25,606	-		Synpcc7942_0025	0.11	-0.1
25,610	+		Synpcc7942_0025	0.11	-1.9
25,645	+		Synpcc7942_0025	0.13	-1.1
25,648	-		Synpcc7942_0025	0.14	+0.7
25,653	-		Synpcc7942_0025	0.14	+0.1
25,653	-		Synpcc7942_0025	0.14	-2.4
25,660	+		Synpcc7942_0025	0.14	-0.1
25,692	-		Synpcc7942_0025	0.16	+0.9
25,692	-		Synpcc7942_0025	0.16	+0.7
25,705	+		Synpcc7942_0025	0.17	-2.9
25,713	-		Synpcc7942_0025	0.17	+0.7
25,713	-		Synpcc7942_0025	0.17	-0.1
25,735	-		Synpcc7942_0025	0.19	+1.1
25,740	+		Synpcc7942_0025	0.19	+0.2
25,741	+		Synpcc7942_0025	0.19	+1.0
25,742	+		Synpcc7942_0025	0.19	+1.8
25,748	-		Synpcc7942_0025	0.19	-1.4
25,751	+		Synpcc7942_0025	0.20	+1.0
25,756	+		Synpcc7942_0025	0.20	-3.4
25,759	-		Synpcc7942_0025	0.20	+0.0
25,761	+		Synpcc7942_0025	0.20	+1.7
25,761	+		Synpcc7942_0025	0.20	+0.3
25,764	-		Synpcc7942_0025	0.20	-2.1
25,764	-		Synpcc7942_0025	0.20	+1.3
25,769	-		Synpcc7942_0025	0.21	+1.9
25,769	-		Synpcc7942_0025	0.21	+1.8
25,769	-		Synpcc7942_0025	0.21	+3.4
25,769	-		Synpcc7942_0025	0.21	+0.4
25,769	-		Synpcc7942_0025	0.21	-0.4
25,774	-		Synpcc7942_0025	0.21	+1.1
25,776	-		Synpcc7942_0025	0.21	+0.0
25,794	-		Synpcc7942_0025	0.22	+0.1
25,811	+		Synpcc7942_0025	0.23	+0.5
25,814	-		Synpcc7942_0025	0.23	+2.7
25,814	-		Synpcc7942_0025	0.23	+0.2
25,814	-		Synpcc7942_0025	0.23	-1.1
25,817	+		Synpcc7942_0025	0.23	-2.1
25,873	-		Synpcc7942_0025	0.27	+1.3
25,894	+		Synpcc7942_0025	0.28	-2.1
25,905	+		Synpcc7942_0025	0.29	-2.7
25,906	-				+1.5
25,906	-		Synpcc7942_0025	0.29	-0.3
25,906	-		Synpcc7942_0025	0.29	-2.7
25,908	+		Synpcc7942_0025	0.29	+0.3
25,910	+		Synpcc7942_0025	0.29	-0.9
25,924	-		Synpcc7942_0025	0.30	+1.5
25,936	-		Synpcc7942_0025	0.30	+0.7
25,955	+		Synpcc7942_0025	0.32	+0.3
25,955	+		Synpcc7942_0025	0.32	-1.1
25,955	+		Synpcc7942_0025	0.32	-0.1
25,959	-		Synpcc7942_0025	0.32	+0.9
25,963	-		Synpcc7942_0025	0.32	-1.1
25,963	-		Synpcc7942_0025	0.32	-2.0
25,963	-		Synpcc7942_0025	0.32	+1.7
25,966	+		Synpcc7942_0025	0.32	-0.1
25,966	+		Synpcc7942_0025	0.32	+1.0
25,966	+		Synpcc7942_0025	0.32	+1.1
25,966	+		Synpcc7942_0025	0.32	-0.1
25,966	+		Synpcc7942_0025	0.32	-1.1
25,966	+		Synpcc7942_0025	0.32	-1.3
25,966	+		Synpcc7942_0025	0.32	+1.6
25,966	+		Synpcc7942_0025	0.32	-0.1
25,966	+		Synpcc7942_0025	0.32	+0.8
25,966	+		Synpcc7942_0025	0.32	-0.5
25,966	+		Synpcc7942_0025	0.32	+0.7
25,974	-		Synpcc7942_0025	0.33	+0.4
25,974	-		Synpcc7942_0025	0.33	+0.4
25,974	-		Synpcc7942_0025	0.33	-2.4
25,974	-		Synpcc7942_0025	0.33	-0.3
25,991	+		Synpcc7942_0025	0.34	+0.9
26,021	+		Synpcc7942_0025	0.35	+1.7
26,053	-		Synpcc7942_0025	0.37	+1.6
26,055	-		Synpcc7942_0025	0.37	+0.5
26,070	+		Synpcc7942_0025	0.38	+0.9
26,078	-		Synpcc7942_0025	0.39	-1.9
26,078	-		Synpcc7942_0025	0.39	-1.3
26,101	+		Synpcc7942_0025	0.40	-0.7
26,113	+		Synpcc7942_0025	0.41	+0.9
26,126	-		Synpcc7942_0025	0.42	+1.3
26,126	-		Synpcc7942_0025	0.42	+1.0
26,137	-		Synpcc7942_0025	0.42	+0.5
26,137	-		Synpcc7942_0025	0.42	-3.2
26,147	-		Synpcc7942_0025	0.43	-0.1
26,159	-		Synpcc7942_0025	0.44	-0.3
26,170	-		Synpcc7942_0025	0.44	+0.5
26,201	+		Synpcc7942_0025	0.46	+0.3
26,209	-		Synpcc7942_0025	0.46	-0.4
26,220	+		Synpcc7942_0025	0.47	-2.1
26,228	-		Synpcc7942_0025	0.48	+0.9
26,228	-		Synpcc7942_0025	0.48	-1.7
26,248	-		Synpcc7942_0025	0.49	-0.6
26,305	+		Synpcc7942_0025	0.52	-0.6
26,311	+		Synpcc7942_0025	0.52	+0.8
26,313	-		Synpcc7942_0025	0.53	-0.2
26,325	-		Synpcc7942_0025	0.53	-1.5
26,334	+		Synpcc7942_0025	0.54	-0.7