Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05376 and H281DRAFT_05377 are separated by 151 nucleotides H281DRAFT_05377 and H281DRAFT_05378 are separated by 44 nucleotides
H281DRAFT_05376: H281DRAFT_05376 - hypothetical protein, at 133,598 to 134,572
_05376
H281DRAFT_05377: H281DRAFT_05377 - Inosine-uridine nucleoside N-ribohydrolase, at 134,724 to 135,860
_05377
H281DRAFT_05378: H281DRAFT_05378 - transcriptional regulator, LysR family, at 135,905 to 136,861
_05378
Position (kb) 134
135
136 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 133.727 kb on - strand, within H281DRAFT_05376 at 133.774 kb on - strand, within H281DRAFT_05376 at 134.389 kb on + strand, within H281DRAFT_05376 at 134.411 kb on - strand, within H281DRAFT_05376 at 134.583 kb on + strand at 134.583 kb on + strand at 134.583 kb on + strand at 134.643 kb on - strand at 134.645 kb on + strand at 134.646 kb on - strand at 134.673 kb on + strand at 134.688 kb on + strand at 134.751 kb on + strand at 134.752 kb on - strand at 134.755 kb on + strand at 134.755 kb on + strand at 134.848 kb on - strand, within H281DRAFT_05377 at 135.025 kb on - strand at 135.039 kb on + strand, within H281DRAFT_05377 at 135.339 kb on + strand, within H281DRAFT_05377 at 135.339 kb on + strand, within H281DRAFT_05377 at 135.339 kb on + strand, within H281DRAFT_05377 at 135.339 kb on + strand, within H281DRAFT_05377 at 135.339 kb on + strand, within H281DRAFT_05377 at 135.340 kb on - strand, within H281DRAFT_05377 at 135.371 kb on + strand, within H281DRAFT_05377 at 135.492 kb on - strand, within H281DRAFT_05377 at 135.502 kb on - strand, within H281DRAFT_05377 at 135.543 kb on - strand, within H281DRAFT_05377 at 135.571 kb on - strand, within H281DRAFT_05377 at 135.820 kb on - strand at 135.863 kb on + strand at 135.863 kb on + strand at 135.864 kb on - strand at 135.878 kb on - strand at 136.085 kb on + strand, within H281DRAFT_05378 at 136.085 kb on + strand, within H281DRAFT_05378 at 136.086 kb on - strand, within H281DRAFT_05378 at 136.176 kb on + strand, within H281DRAFT_05378 at 136.177 kb on - strand, within H281DRAFT_05378 at 136.271 kb on - strand, within H281DRAFT_05378 at 136.324 kb on + strand, within H281DRAFT_05378 at 136.468 kb on + strand, within H281DRAFT_05378 at 136.468 kb on + strand, within H281DRAFT_05378 at 136.468 kb on + strand, within H281DRAFT_05378 at 136.507 kb on - strand, within H281DRAFT_05378 at 136.514 kb on - strand, within H281DRAFT_05378 at 136.514 kb on - strand, within H281DRAFT_05378 at 136.663 kb on - strand, within H281DRAFT_05378 at 136.665 kb on + strand, within H281DRAFT_05378 at 136.857 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 133,727 - H281DRAFT_05376 0.13 +4.2 133,774 - H281DRAFT_05376 0.18 +1.4 134,389 + H281DRAFT_05376 0.81 +0.4 134,411 - H281DRAFT_05376 0.83 +1.8 134,583 + +0.4 134,583 + -0.1 134,583 + +1.3 134,643 - +0.1 134,645 + +0.9 134,646 - +0.3 134,673 + -0.3 134,688 + -0.8 134,751 + -1.3 134,752 - -0.7 134,755 + +0.5 134,755 + -0.8 134,848 - H281DRAFT_05377 0.11 +0.2 135,025 - +2.0 135,039 + H281DRAFT_05377 0.28 -0.6 135,339 + H281DRAFT_05377 0.54 +0.2 135,339 + H281DRAFT_05377 0.54 +0.1 135,339 + H281DRAFT_05377 0.54 -0.4 135,339 + H281DRAFT_05377 0.54 -1.1 135,339 + H281DRAFT_05377 0.54 +0.7 135,340 - H281DRAFT_05377 0.54 +0.0 135,371 + H281DRAFT_05377 0.57 +0.2 135,492 - H281DRAFT_05377 0.68 -0.4 135,502 - H281DRAFT_05377 0.68 +0.9 135,543 - H281DRAFT_05377 0.72 +0.6 135,571 - H281DRAFT_05377 0.74 -0.0 135,820 - +0.3 135,863 + +0.6 135,863 + -0.3 135,864 - -0.7 135,878 - -1.3 136,085 + H281DRAFT_05378 0.19 +0.0 136,085 + H281DRAFT_05378 0.19 -0.4 136,086 - H281DRAFT_05378 0.19 +0.3 136,176 + H281DRAFT_05378 0.28 -0.4 136,177 - H281DRAFT_05378 0.28 -1.7 136,271 - H281DRAFT_05378 0.38 +0.4 136,324 + H281DRAFT_05378 0.44 -0.1 136,468 + H281DRAFT_05378 0.59 +0.3 136,468 + H281DRAFT_05378 0.59 +0.0 136,468 + H281DRAFT_05378 0.59 +0.1 136,507 - H281DRAFT_05378 0.63 -0.6 136,514 - H281DRAFT_05378 0.64 -0.3 136,514 - H281DRAFT_05378 0.64 +0.4 136,663 - H281DRAFT_05378 0.79 +0.2 136,665 + H281DRAFT_05378 0.79 -0.1 136,857 - +1.3
Or see this region's nucleotide sequence