Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05300 and H281DRAFT_05301 are separated by 226 nucleotides H281DRAFT_05301 and H281DRAFT_05302 are separated by 28 nucleotides
H281DRAFT_05300: H281DRAFT_05300 - amino acid ABC transporter substrate-binding protein, PAAT family, at 42,489 to 43,316
_05300
H281DRAFT_05301: H281DRAFT_05301 - Isopenicillin N synthase, at 43,543 to 44,517
_05301
H281DRAFT_05302: H281DRAFT_05302 - FAD/FMN-containing dehydrogenase, at 44,546 to 45,979
_05302
Position (kb) 43
44
45 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 42.719 kb on - strand, within H281DRAFT_05300 at 42.839 kb on - strand, within H281DRAFT_05300 at 42.839 kb on - strand, within H281DRAFT_05300 at 42.976 kb on + strand, within H281DRAFT_05300 at 42.977 kb on - strand, within H281DRAFT_05300 at 43.382 kb on - strand at 43.383 kb on + strand at 43.383 kb on + strand at 43.384 kb on - strand at 43.385 kb on + strand at 43.439 kb on - strand at 43.484 kb on + strand at 43.484 kb on + strand at 43.660 kb on + strand, within H281DRAFT_05301 at 43.660 kb on + strand, within H281DRAFT_05301 at 43.961 kb on - strand, within H281DRAFT_05301 at 43.963 kb on + strand, within H281DRAFT_05301 at 44.215 kb on - strand, within H281DRAFT_05301 at 44.215 kb on - strand, within H281DRAFT_05301 at 44.452 kb on + strand at 44.454 kb on + strand at 44.454 kb on + strand at 44.936 kb on - strand, within H281DRAFT_05302 at 45.432 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 42,719 - H281DRAFT_05300 0.28 -0.1 42,839 - H281DRAFT_05300 0.42 -2.8 42,839 - H281DRAFT_05300 0.42 +0.2 42,976 + H281DRAFT_05300 0.59 +0.8 42,977 - H281DRAFT_05300 0.59 -0.3 43,382 - -0.1 43,383 + +0.5 43,383 + -0.6 43,384 - +0.3 43,385 + +0.9 43,439 - +0.5 43,484 + +2.5 43,484 + -0.1 43,660 + H281DRAFT_05301 0.12 +0.4 43,660 + H281DRAFT_05301 0.12 -0.1 43,961 - H281DRAFT_05301 0.43 +0.6 43,963 + H281DRAFT_05301 0.43 -0.1 44,215 - H281DRAFT_05301 0.69 -0.5 44,215 - H281DRAFT_05301 0.69 -0.1 44,452 + +0.6 44,454 + +0.9 44,454 + +1.7 44,936 - H281DRAFT_05302 0.27 -0.8 45,432 - -1.6
Or see this region's nucleotide sequence