Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05230 and H281DRAFT_05231 are separated by 426 nucleotides H281DRAFT_05231 and H281DRAFT_05232 are separated by 902 nucleotides
H281DRAFT_05230: H281DRAFT_05230 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 192,936 to 194,750
_05230
H281DRAFT_05231: H281DRAFT_05231 - 2-keto-4-pentenoate hydratase, at 195,177 to 195,938
_05231
H281DRAFT_05232: H281DRAFT_05232 - putative serine protein kinase, PrkA, at 196,841 to 198,763
_05232
Position (kb) 195
196 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 194.187 kb on - strand, within H281DRAFT_05230 at 194.761 kb on - strand at 194.761 kb on - strand at 194.880 kb on + strand at 194.881 kb on - strand at 194.881 kb on - strand at 194.884 kb on + strand at 194.913 kb on + strand at 194.914 kb on - strand at 195.074 kb on + strand at 195.074 kb on + strand at 195.107 kb on + strand at 195.107 kb on + strand at 195.111 kb on - strand at 195.150 kb on + strand at 195.165 kb on + strand at 195.165 kb on + strand at 195.166 kb on - strand at 195.166 kb on - strand at 195.749 kb on + strand, within H281DRAFT_05231 at 195.778 kb on + strand, within H281DRAFT_05231 at 195.779 kb on - strand, within H281DRAFT_05231 at 195.852 kb on + strand, within H281DRAFT_05231 at 195.852 kb on + strand, within H281DRAFT_05231 at 195.853 kb on - strand, within H281DRAFT_05231 at 195.978 kb on + strand at 195.996 kb on + strand at 196.069 kb on + strand at 196.089 kb on + strand at 196.209 kb on + strand at 196.350 kb on - strand at 196.350 kb on - strand at 196.350 kb on - strand at 196.350 kb on - strand at 196.398 kb on + strand at 196.398 kb on + strand at 196.464 kb on - strand at 196.464 kb on - strand at 196.464 kb on - strand at 196.464 kb on - strand at 196.482 kb on + strand at 196.482 kb on + strand at 196.666 kb on + strand at 196.667 kb on - strand at 196.667 kb on - strand at 196.734 kb on + strand at 196.734 kb on + strand at 196.837 kb on + strand at 196.837 kb on + strand at 196.847 kb on - strand at 196.850 kb on + strand at 196.851 kb on - strand at 196.911 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 194,187 - H281DRAFT_05230 0.69 +0.7 194,761 - +0.3 194,761 - +0.5 194,880 + -0.3 194,881 - -0.4 194,881 - +1.0 194,884 + -0.9 194,913 + -0.1 194,914 - +0.2 195,074 + -0.7 195,074 + +0.6 195,107 + -0.1 195,107 + -0.8 195,111 - +0.2 195,150 + +1.2 195,165 + -0.6 195,165 + +0.6 195,166 - +1.0 195,166 - -0.3 195,749 + H281DRAFT_05231 0.75 -1.0 195,778 + H281DRAFT_05231 0.79 +0.5 195,779 - H281DRAFT_05231 0.79 -0.0 195,852 + H281DRAFT_05231 0.89 -0.8 195,852 + H281DRAFT_05231 0.89 -0.4 195,853 - H281DRAFT_05231 0.89 +0.7 195,978 + +0.5 195,996 + -0.3 196,069 + -0.2 196,089 + -0.3 196,209 + -0.1 196,350 - +0.8 196,350 - -0.6 196,350 - -0.9 196,350 - +0.3 196,398 + +0.4 196,398 + -0.4 196,464 - -0.3 196,464 - -0.2 196,464 - +0.8 196,464 - -0.2 196,482 + +0.1 196,482 + +0.1 196,666 + -2.2 196,667 - +0.2 196,667 - -0.1 196,734 + -0.2 196,734 + -1.6 196,837 + +0.0 196,837 + +3.3 196,847 - +0.2 196,850 + +0.1 196,851 - +1.7 196,911 - -0.6
Or see this region's nucleotide sequence