Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04455 and H281DRAFT_04456 are separated by 106 nucleotides H281DRAFT_04456 and H281DRAFT_04457 overlap by 4 nucleotides H281DRAFT_04457 and H281DRAFT_04458 are separated by 10 nucleotides
H281DRAFT_04455: H281DRAFT_04455 - Protein of unknown function (DUF2993), at 175,824 to 178,043
_04455
H281DRAFT_04456: H281DRAFT_04456 - 5-deoxyglucuronate isomerase, at 178,150 to 178,950
_04456
H281DRAFT_04457: H281DRAFT_04457 - 2-keto-myo-inositol dehydratase, at 178,947 to 179,897
_04457
H281DRAFT_04458: H281DRAFT_04458 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 179,908 to 181,893
_04458
Position (kb) 178
179
180 Strain fitness (log2 ratio) -1
0
1
2 at 177.954 kb on + strand at 178.239 kb on - strand, within H281DRAFT_04456 at 178.392 kb on - strand, within H281DRAFT_04456 at 178.394 kb on + strand, within H281DRAFT_04456 at 178.395 kb on - strand, within H281DRAFT_04456 at 178.455 kb on - strand, within H281DRAFT_04456 at 178.537 kb on + strand, within H281DRAFT_04456 at 178.538 kb on - strand, within H281DRAFT_04456 at 178.542 kb on - strand, within H281DRAFT_04456 at 178.900 kb on - strand at 178.942 kb on + strand at 178.943 kb on - strand at 179.056 kb on + strand, within H281DRAFT_04457 at 179.414 kb on - strand, within H281DRAFT_04457 at 179.434 kb on + strand, within H281DRAFT_04457 at 179.435 kb on - strand, within H281DRAFT_04457 at 179.463 kb on - strand, within H281DRAFT_04457 at 179.581 kb on + strand, within H281DRAFT_04457 at 179.880 kb on + strand at 179.880 kb on + strand at 180.116 kb on + strand, within H281DRAFT_04458 at 180.116 kb on + strand, within H281DRAFT_04458 at 180.117 kb on - strand, within H281DRAFT_04458 at 180.313 kb on - strand, within H281DRAFT_04458 at 180.401 kb on + strand, within H281DRAFT_04458 at 180.512 kb on + strand, within H281DRAFT_04458 at 180.685 kb on - strand, within H281DRAFT_04458 at 180.685 kb on - strand, within H281DRAFT_04458 at 180.685 kb on - strand, within H281DRAFT_04458 at 180.882 kb on + strand, within H281DRAFT_04458
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 177,954 + +0.9 178,239 - H281DRAFT_04456 0.11 -0.4 178,392 - H281DRAFT_04456 0.30 +0.7 178,394 + H281DRAFT_04456 0.30 -0.1 178,395 - H281DRAFT_04456 0.31 +1.7 178,455 - H281DRAFT_04456 0.38 +0.8 178,537 + H281DRAFT_04456 0.48 -0.0 178,538 - H281DRAFT_04456 0.48 +1.6 178,542 - H281DRAFT_04456 0.49 +2.3 178,900 - -0.2 178,942 + +0.9 178,943 - +0.9 179,056 + H281DRAFT_04457 0.11 -1.5 179,414 - H281DRAFT_04457 0.49 -0.2 179,434 + H281DRAFT_04457 0.51 +0.4 179,435 - H281DRAFT_04457 0.51 -1.1 179,463 - H281DRAFT_04457 0.54 +0.7 179,581 + H281DRAFT_04457 0.67 +0.6 179,880 + +0.0 179,880 + +0.2 180,116 + H281DRAFT_04458 0.10 +0.6 180,116 + H281DRAFT_04458 0.10 +1.2 180,117 - H281DRAFT_04458 0.11 +1.0 180,313 - H281DRAFT_04458 0.20 +0.3 180,401 + H281DRAFT_04458 0.25 +0.1 180,512 + H281DRAFT_04458 0.30 -0.7 180,685 - H281DRAFT_04458 0.39 -0.5 180,685 - H281DRAFT_04458 0.39 -0.5 180,685 - H281DRAFT_04458 0.39 -0.1 180,882 + H281DRAFT_04458 0.49 +0.7
Or see this region's nucleotide sequence