Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03214 and H281DRAFT_03215 are separated by 463 nucleotides H281DRAFT_03215 and H281DRAFT_03216 overlap by 4 nucleotides H281DRAFT_03216 and H281DRAFT_03217 are separated by 58 nucleotides
H281DRAFT_03214: H281DRAFT_03214 - 4-hydroxyphenylpyruvate dioxygenase, at 260,641 to 262,524
_03214
H281DRAFT_03215: H281DRAFT_03215 - 3-dehydroquinate dehydratase, at 262,988 to 263,443
_03215
H281DRAFT_03216: H281DRAFT_03216 - shikimate dehydrogenase (EC 1.1.1.25), at 263,440 to 264,342
_03216
H281DRAFT_03217: H281DRAFT_03217 - MFS transporter, ACS family, D-galactonate transporter, at 264,401 to 265,768
_03217
Position (kb) 263
264
265 Strain fitness (log2 ratio) -1
0
1 at 262.480 kb on + strand at 262.699 kb on + strand at 262.896 kb on + strand at 262.946 kb on - strand at 263.004 kb on + strand at 263.226 kb on - strand, within H281DRAFT_03215 at 263.294 kb on - strand, within H281DRAFT_03215 at 263.336 kb on + strand, within H281DRAFT_03215 at 263.337 kb on - strand, within H281DRAFT_03215 at 263.388 kb on - strand, within H281DRAFT_03215 at 263.677 kb on + strand, within H281DRAFT_03216 at 263.678 kb on - strand, within H281DRAFT_03216 at 263.694 kb on - strand, within H281DRAFT_03216 at 263.694 kb on - strand, within H281DRAFT_03216 at 263.699 kb on - strand, within H281DRAFT_03216 at 264.170 kb on - strand, within H281DRAFT_03216 at 264.310 kb on + strand at 264.311 kb on - strand at 264.393 kb on - strand at 264.537 kb on - strand at 264.641 kb on + strand, within H281DRAFT_03217 at 264.642 kb on - strand, within H281DRAFT_03217 at 264.702 kb on - strand, within H281DRAFT_03217 at 264.702 kb on - strand, within H281DRAFT_03217 at 264.884 kb on + strand, within H281DRAFT_03217 at 264.884 kb on + strand, within H281DRAFT_03217 at 264.885 kb on - strand, within H281DRAFT_03217 at 264.902 kb on - strand, within H281DRAFT_03217 at 265.070 kb on + strand, within H281DRAFT_03217 at 265.071 kb on - strand, within H281DRAFT_03217
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 262,480 + -1.0 262,699 + +0.4 262,896 + +0.2 262,946 - -0.3 263,004 + +0.0 263,226 - H281DRAFT_03215 0.52 +0.4 263,294 - H281DRAFT_03215 0.67 -0.2 263,336 + H281DRAFT_03215 0.76 -0.1 263,337 - H281DRAFT_03215 0.77 +1.2 263,388 - H281DRAFT_03215 0.88 -0.6 263,677 + H281DRAFT_03216 0.26 +0.8 263,678 - H281DRAFT_03216 0.26 +0.3 263,694 - H281DRAFT_03216 0.28 -0.0 263,694 - H281DRAFT_03216 0.28 +1.4 263,699 - H281DRAFT_03216 0.29 +0.8 264,170 - H281DRAFT_03216 0.81 +0.2 264,310 + +1.5 264,311 - -0.5 264,393 - +0.0 264,537 - +1.3 264,641 + H281DRAFT_03217 0.18 -0.3 264,642 - H281DRAFT_03217 0.18 -1.0 264,702 - H281DRAFT_03217 0.22 +0.6 264,702 - H281DRAFT_03217 0.22 -0.6 264,884 + H281DRAFT_03217 0.35 +0.1 264,884 + H281DRAFT_03217 0.35 -0.1 264,885 - H281DRAFT_03217 0.35 +0.2 264,902 - H281DRAFT_03217 0.37 +0.2 265,070 + H281DRAFT_03217 0.49 -0.5 265,071 - H281DRAFT_03217 0.49 -0.8
Or see this region's nucleotide sequence