Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01128

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01127 and H281DRAFT_01128 are separated by 6 nucleotidesH281DRAFT_01128 and H281DRAFT_01129 are separated by 74 nucleotides H281DRAFT_01127: H281DRAFT_01127 - Molecular chaperone, at 1,269,560 to 1,272,529 _01127 H281DRAFT_01128: H281DRAFT_01128 - phosphonoacetaldehyde hydrolase, at 1,272,536 to 1,273,339 _01128 H281DRAFT_01129: H281DRAFT_01129 - 2-aminoethylphosphonate-pyruvate transaminase, at 1,273,414 to 1,274,664 _01129 Position (kb) 1272 1273 1274Strain fitness (log2 ratio) -2 -1 0 1 2at 1271.603 kb on - strand, within H281DRAFT_01127at 1272.005 kb on + strand, within H281DRAFT_01127at 1272.221 kb on + strand, within H281DRAFT_01127at 1272.222 kb on - strand, within H281DRAFT_01127at 1272.846 kb on + strand, within H281DRAFT_01128at 1272.855 kb on + strand, within H281DRAFT_01128at 1272.855 kb on + strand, within H281DRAFT_01128at 1272.855 kb on + strand, within H281DRAFT_01128at 1272.856 kb on - strand, within H281DRAFT_01128at 1272.856 kb on - strand, within H281DRAFT_01128at 1273.043 kb on - strandat 1273.043 kb on - strand, within H281DRAFT_01128at 1273.086 kb on + strand, within H281DRAFT_01128at 1273.125 kb on + strand, within H281DRAFT_01128at 1273.125 kb on + strand, within H281DRAFT_01128at 1273.125 kb on + strand, within H281DRAFT_01128at 1273.125 kb on + strand, within H281DRAFT_01128at 1273.126 kb on - strandat 1273.126 kb on - strand, within H281DRAFT_01128at 1273.126 kb on - strand, within H281DRAFT_01128at 1273.233 kb on - strand, within H281DRAFT_01128at 1273.287 kb on + strandat 1273.513 kb on + strandat 1273.595 kb on + strand, within H281DRAFT_01129at 1273.596 kb on - strand, within H281DRAFT_01129at 1273.840 kb on - strand, within H281DRAFT_01129at 1274.179 kb on - strand, within H281DRAFT_01129

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C)
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1,271,603 - H281DRAFT_01127 0.69 -0.0
1,272,005 + H281DRAFT_01127 0.82 -0.5
1,272,221 + H281DRAFT_01127 0.90 +0.3
1,272,222 - H281DRAFT_01127 0.90 -0.4
1,272,846 + H281DRAFT_01128 0.39 +1.2
1,272,855 + H281DRAFT_01128 0.40 +0.1
1,272,855 + H281DRAFT_01128 0.40 -0.1
1,272,855 + H281DRAFT_01128 0.40 -0.2
1,272,856 - H281DRAFT_01128 0.40 +0.3
1,272,856 - H281DRAFT_01128 0.40 -2.4
1,273,043 - +2.1
1,273,043 - H281DRAFT_01128 0.63 -1.1
1,273,086 + H281DRAFT_01128 0.68 -1.5
1,273,125 + H281DRAFT_01128 0.73 +0.9
1,273,125 + H281DRAFT_01128 0.73 +0.4
1,273,125 + H281DRAFT_01128 0.73 +0.0
1,273,125 + H281DRAFT_01128 0.73 +0.2
1,273,126 - +0.5
1,273,126 - H281DRAFT_01128 0.73 -0.5
1,273,126 - H281DRAFT_01128 0.73 -0.1
1,273,233 - H281DRAFT_01128 0.87 -1.5
1,273,287 + +0.7
1,273,513 + +1.3
1,273,595 + H281DRAFT_01129 0.14 -0.4
1,273,596 - H281DRAFT_01129 0.15 +1.2
1,273,840 - H281DRAFT_01129 0.34 -0.6
1,274,179 - H281DRAFT_01129 0.61 -0.2

Or see this region's nucleotide sequence