Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01020 and H281DRAFT_01021 are separated by 118 nucleotides H281DRAFT_01021 and H281DRAFT_01022 are separated by 187 nucleotides H281DRAFT_01022 and H281DRAFT_01023 are separated by 256 nucleotides
H281DRAFT_01020: H281DRAFT_01020 - FMN-dependent NADH-azoreductase, at 1,144,644 to 1,145,276
_01020
H281DRAFT_01021: H281DRAFT_01021 - Nitroreductase, at 1,145,395 to 1,145,841
_01021
H281DRAFT_01022: H281DRAFT_01022 - GntR family transcriptional regulator / MocR family aminotransferase, at 1,146,029 to 1,147,441
_01022
H281DRAFT_01023: H281DRAFT_01023 - filamentous hemagglutinin family N-terminal domain-containing protein, at 1,147,698 to 1,149,947
_01023
Position (kb) 1146
1147
1148 Strain fitness (log2 ratio) -1
0
1 at 1145.387 kb on - strand at 1145.683 kb on + strand, within H281DRAFT_01021 at 1145.684 kb on - strand, within H281DRAFT_01021 at 1145.817 kb on + strand at 1146.115 kb on - strand at 1146.209 kb on + strand, within H281DRAFT_01022 at 1146.325 kb on + strand, within H281DRAFT_01022 at 1146.588 kb on + strand, within H281DRAFT_01022 at 1146.691 kb on + strand, within H281DRAFT_01022 at 1146.730 kb on - strand, within H281DRAFT_01022 at 1146.734 kb on + strand, within H281DRAFT_01022 at 1147.152 kb on + strand, within H281DRAFT_01022 at 1147.155 kb on - strand, within H281DRAFT_01022 at 1147.874 kb on + strand at 1148.074 kb on + strand, within H281DRAFT_01023 at 1148.075 kb on - strand, within H281DRAFT_01023 at 1148.075 kb on - strand, within H281DRAFT_01023 at 1148.175 kb on + strand, within H281DRAFT_01023 at 1148.176 kb on - strand, within H281DRAFT_01023
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 1,145,387 - +0.6 1,145,683 + H281DRAFT_01021 0.64 +0.6 1,145,684 - H281DRAFT_01021 0.65 -1.0 1,145,817 + -0.7 1,146,115 - -1.4 1,146,209 + H281DRAFT_01022 0.13 +0.4 1,146,325 + H281DRAFT_01022 0.21 -0.3 1,146,588 + H281DRAFT_01022 0.40 +0.7 1,146,691 + H281DRAFT_01022 0.47 +0.0 1,146,730 - H281DRAFT_01022 0.50 -0.2 1,146,734 + H281DRAFT_01022 0.50 +0.3 1,147,152 + H281DRAFT_01022 0.79 +0.9 1,147,155 - H281DRAFT_01022 0.80 +1.0 1,147,874 + +0.7 1,148,074 + H281DRAFT_01023 0.17 -0.6 1,148,075 - H281DRAFT_01023 0.17 -0.4 1,148,075 - H281DRAFT_01023 0.17 -0.5 1,148,175 + H281DRAFT_01023 0.21 -0.5 1,148,176 - H281DRAFT_01023 0.21 -1.5
Or see this region's nucleotide sequence