Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00696

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00695 and H281DRAFT_00696 are separated by 47 nucleotidesH281DRAFT_00696 and H281DRAFT_00697 are separated by 15 nucleotides H281DRAFT_00695: H281DRAFT_00695 - choline-sulfatase, at 775,582 to 777,012 _00695 H281DRAFT_00696: H281DRAFT_00696 - Predicted arabinose efflux permease, MFS family, at 777,060 to 778,361 _00696 H281DRAFT_00697: H281DRAFT_00697 - FAD/FMN-containing dehydrogenase, at 778,377 to 779,786 _00697 Position (kb) 777 778 779Strain fitness (log2 ratio) -1 0 1at 776.339 kb on - strand, within H281DRAFT_00695at 776.488 kb on + strand, within H281DRAFT_00695at 776.587 kb on - strand, within H281DRAFT_00695at 776.587 kb on - strand, within H281DRAFT_00695at 777.434 kb on - strand, within H281DRAFT_00696at 777.496 kb on - strand, within H281DRAFT_00696at 777.569 kb on - strand, within H281DRAFT_00696at 777.721 kb on - strand, within H281DRAFT_00696at 778.093 kb on + strand, within H281DRAFT_00696at 779.218 kb on - strand, within H281DRAFT_00697at 779.218 kb on - strand, within H281DRAFT_00697at 779.218 kb on - strand, within H281DRAFT_00697at 779.248 kb on - strand, within H281DRAFT_00697

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C)
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776,339 - H281DRAFT_00695 0.53 +1.1
776,488 + H281DRAFT_00695 0.63 +1.2
776,587 - H281DRAFT_00695 0.70 +0.7
776,587 - H281DRAFT_00695 0.70 -0.4
777,434 - H281DRAFT_00696 0.29 -0.3
777,496 - H281DRAFT_00696 0.33 +0.2
777,569 - H281DRAFT_00696 0.39 +0.2
777,721 - H281DRAFT_00696 0.51 -0.5
778,093 + H281DRAFT_00696 0.79 +0.0
779,218 - H281DRAFT_00697 0.60 -0.3
779,218 - H281DRAFT_00697 0.60 -0.3
779,218 - H281DRAFT_00697 0.60 -0.0
779,248 - H281DRAFT_00697 0.62 -0.2

Or see this region's nucleotide sequence