Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3445 and Dsui_3446 overlap by 1 nucleotides Dsui_3446 and Dsui_3447 are separated by 228 nucleotides
Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051
_3445
Dsui_3446: Dsui_3446 - 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase, at 3,705,051 to 3,705,959
_3446
Dsui_3447: Dsui_3447 - signal transduction histidine kinase, at 3,706,188 to 3,707,558
_3447
Position (kb)
3705
3706 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3704.100 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.126 kb on - strand, within Dsui_3445 at 3704.256 kb on - strand, within Dsui_3445 at 3704.487 kb on - strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.642 kb on - strand, within Dsui_3445 at 3704.695 kb on - strand, within Dsui_3445 at 3704.697 kb on + strand, within Dsui_3445 at 3704.759 kb on + strand, within Dsui_3445 at 3704.801 kb on + strand, within Dsui_3445 at 3704.807 kb on - strand, within Dsui_3445 at 3704.913 kb on - strand at 3704.918 kb on + strand at 3705.146 kb on - strand, within Dsui_3446 at 3705.230 kb on - strand, within Dsui_3446 at 3705.237 kb on - strand, within Dsui_3446 at 3705.541 kb on + strand, within Dsui_3446 at 3705.661 kb on + strand, within Dsui_3446 at 3705.715 kb on - strand, within Dsui_3446 at 3705.750 kb on - strand, within Dsui_3446 at 3706.015 kb on + strand at 3706.035 kb on + strand at 3706.053 kb on - strand at 3706.104 kb on - strand at 3706.259 kb on + strand at 3706.264 kb on + strand at 3706.848 kb on + strand at 3706.958 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 3,704,100 + Dsui_3445 0.42 -3.4 3,704,118 + Dsui_3445 0.43 +0.3 3,704,118 + Dsui_3445 0.43 -1.9 3,704,126 - Dsui_3445 0.44 -1.0 3,704,256 - Dsui_3445 0.52 -1.1 3,704,487 - Dsui_3445 0.66 -1.6 3,704,615 + Dsui_3445 0.73 -1.2 3,704,615 + Dsui_3445 0.73 -1.2 3,704,615 + Dsui_3445 0.73 -1.3 3,704,642 - Dsui_3445 0.75 -1.4 3,704,695 - Dsui_3445 0.78 -0.1 3,704,697 + Dsui_3445 0.78 -0.9 3,704,759 + Dsui_3445 0.82 +0.2 3,704,801 + Dsui_3445 0.85 -0.9 3,704,807 - Dsui_3445 0.85 -2.1 3,704,913 - -2.2 3,704,918 + -1.5 3,705,146 - Dsui_3446 0.10 -3.0 3,705,230 - Dsui_3446 0.20 -0.8 3,705,237 - Dsui_3446 0.20 -1.8 3,705,541 + Dsui_3446 0.54 -1.4 3,705,661 + Dsui_3446 0.67 -1.6 3,705,715 - Dsui_3446 0.73 -3.3 3,705,750 - Dsui_3446 0.77 -1.2 3,706,015 + +1.0 3,706,035 + +0.3 3,706,053 - +0.3 3,706,104 - +1.3 3,706,259 + +0.6 3,706,264 + +0.7 3,706,848 + -1.8 3,706,958 - -3.1
Or see this region's nucleotide sequence