Strain Fitness in Dechlorosoma suillum PS around Dsui_3446

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3445 and Dsui_3446 overlap by 1 nucleotidesDsui_3446 and Dsui_3447 are separated by 228 nucleotides Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051 _3445 Dsui_3446: Dsui_3446 - 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase, at 3,705,051 to 3,705,959 _3446 Dsui_3447: Dsui_3447 - signal transduction histidine kinase, at 3,706,188 to 3,707,558 _3447 Position (kb) 3705 3706Strain fitness (log2 ratio) -3 -2 -1 0 1at 3704.100 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.126 kb on - strand, within Dsui_3445at 3704.256 kb on - strand, within Dsui_3445at 3704.487 kb on - strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.642 kb on - strand, within Dsui_3445at 3704.695 kb on - strand, within Dsui_3445at 3704.697 kb on + strand, within Dsui_3445at 3704.759 kb on + strand, within Dsui_3445at 3704.801 kb on + strand, within Dsui_3445at 3704.807 kb on - strand, within Dsui_3445at 3704.913 kb on - strandat 3704.918 kb on + strandat 3705.146 kb on - strand, within Dsui_3446at 3705.230 kb on - strand, within Dsui_3446at 3705.237 kb on - strand, within Dsui_3446at 3705.541 kb on + strand, within Dsui_3446at 3705.661 kb on + strand, within Dsui_3446at 3705.715 kb on - strand, within Dsui_3446at 3705.750 kb on - strand, within Dsui_3446at 3706.015 kb on + strandat 3706.035 kb on + strandat 3706.053 kb on - strandat 3706.104 kb on - strandat 3706.259 kb on + strandat 3706.264 kb on + strandat 3706.848 kb on + strandat 3706.958 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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3,704,100 + Dsui_3445 0.42 -3.4
3,704,118 + Dsui_3445 0.43 +0.3
3,704,118 + Dsui_3445 0.43 -1.9
3,704,126 - Dsui_3445 0.44 -1.0
3,704,256 - Dsui_3445 0.52 -1.1
3,704,487 - Dsui_3445 0.66 -1.6
3,704,615 + Dsui_3445 0.73 -1.2
3,704,615 + Dsui_3445 0.73 -1.2
3,704,615 + Dsui_3445 0.73 -1.3
3,704,642 - Dsui_3445 0.75 -1.4
3,704,695 - Dsui_3445 0.78 -0.1
3,704,697 + Dsui_3445 0.78 -0.9
3,704,759 + Dsui_3445 0.82 +0.2
3,704,801 + Dsui_3445 0.85 -0.9
3,704,807 - Dsui_3445 0.85 -2.1
3,704,913 - -2.2
3,704,918 + -1.5
3,705,146 - Dsui_3446 0.10 -3.0
3,705,230 - Dsui_3446 0.20 -0.8
3,705,237 - Dsui_3446 0.20 -1.8
3,705,541 + Dsui_3446 0.54 -1.4
3,705,661 + Dsui_3446 0.67 -1.6
3,705,715 - Dsui_3446 0.73 -3.3
3,705,750 - Dsui_3446 0.77 -1.2
3,706,015 + +1.0
3,706,035 + +0.3
3,706,053 - +0.3
3,706,104 - +1.3
3,706,259 + +0.6
3,706,264 + +0.7
3,706,848 + -1.8
3,706,958 - -3.1

Or see this region's nucleotide sequence