Strain Fitness in Dechlorosoma suillum PS around Dsui_2820

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2818 and Dsui_2819 overlap by 31 nucleotidesDsui_2819 and Dsui_2820 are separated by 1 nucleotidesDsui_2820 and Dsui_2821 are separated by 67 nucleotides Dsui_2818: Dsui_2818 - hypothetical protein, at 2,994,830 to 2,995,630 _2818 Dsui_2819: Dsui_2819 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,995,600 to 2,996,373 _2819 Dsui_2820: Dsui_2820 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,996,375 to 2,997,280 _2820 Dsui_2821: Dsui_2821 - K+ transport system, NAD-binding component, at 2,997,348 to 2,998,385 _2821 Position (kb) 2996 2997 2998Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2995.464 kb on - strand, within Dsui_2818at 2995.519 kb on + strand, within Dsui_2818at 2995.527 kb on - strand, within Dsui_2818at 2995.562 kb on - strandat 2995.694 kb on + strand, within Dsui_2819at 2995.821 kb on - strand, within Dsui_2819at 2995.958 kb on - strand, within Dsui_2819at 2995.984 kb on + strand, within Dsui_2819at 2996.125 kb on + strandat 2996.232 kb on + strand, within Dsui_2819at 2996.272 kb on + strand, within Dsui_2819at 2996.272 kb on + strandat 2996.272 kb on + strand, within Dsui_2819at 2996.321 kb on + strandat 2996.364 kb on - strandat 2996.436 kb on - strandat 2996.476 kb on - strand, within Dsui_2820at 2996.664 kb on - strand, within Dsui_2820at 2996.676 kb on + strandat 2996.769 kb on - strand, within Dsui_2820at 2996.851 kb on + strandat 2996.928 kb on - strand, within Dsui_2820at 2997.033 kb on + strandat 2997.120 kb on - strand, within Dsui_2820at 2997.139 kb on + strandat 2997.195 kb on - strandat 2997.195 kb on - strandat 2997.205 kb on - strandat 2997.262 kb on + strandat 2997.297 kb on - strandat 2997.512 kb on + strandat 2997.520 kb on - strand, within Dsui_2821at 2997.629 kb on + strandat 2997.637 kb on - strand, within Dsui_2821at 2997.637 kb on - strandat 2997.704 kb on + strandat 2997.828 kb on - strand, within Dsui_2821at 2997.998 kb on - strand, within Dsui_2821at 2998.212 kb on - strand, within Dsui_2821

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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2,995,464 - Dsui_2818 0.79 -4.2
2,995,519 + Dsui_2818 0.86 -0.1
2,995,527 - Dsui_2818 0.87 +0.5
2,995,562 - -0.5
2,995,694 + Dsui_2819 0.12 -1.1
2,995,821 - Dsui_2819 0.29 +0.1
2,995,958 - Dsui_2819 0.46 -0.3
2,995,984 + Dsui_2819 0.50 -1.4
2,996,125 + -0.6
2,996,232 + Dsui_2819 0.82 -2.6
2,996,272 + Dsui_2819 0.87 -3.7
2,996,272 + -0.8
2,996,272 + Dsui_2819 0.87 -2.2
2,996,321 + -0.6
2,996,364 - +0.8
2,996,436 - -4.3
2,996,476 - Dsui_2820 0.11 -0.7
2,996,664 - Dsui_2820 0.32 -3.6
2,996,676 + -3.2
2,996,769 - Dsui_2820 0.43 -0.4
2,996,851 + -3.4
2,996,928 - Dsui_2820 0.61 -1.4
2,997,033 + -2.4
2,997,120 - Dsui_2820 0.82 -2.2
2,997,139 + -1.6
2,997,195 - -3.6
2,997,195 - -3.6
2,997,205 - -0.9
2,997,262 + -2.4
2,997,297 - -4.4
2,997,512 + -0.6
2,997,520 - Dsui_2821 0.17 -2.9
2,997,629 + -1.0
2,997,637 - Dsui_2821 0.28 +0.2
2,997,637 - +1.4
2,997,704 + +0.8
2,997,828 - Dsui_2821 0.46 -0.2
2,997,998 - Dsui_2821 0.63 -0.2
2,998,212 - Dsui_2821 0.83 -3.4

Or see this region's nucleotide sequence