Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2799 and Dsui_2800 overlap by 1 nucleotides Dsui_2800 and Dsui_2801 are separated by 1 nucleotides
Dsui_2799: Dsui_2799 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 2,968,490 to 2,970,502
_2799
Dsui_2800: Dsui_2800 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 2,970,502 to 2,971,950
_2800
Dsui_2801: Dsui_2801 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 2,971,952 to 2,972,929
_2801
Position (kb)
2970
2971
2972 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 2969.555 kb on - strand, within Dsui_2799 at 2969.563 kb on + strand at 2969.694 kb on + strand at 2969.868 kb on - strand, within Dsui_2799 at 2970.108 kb on - strand, within Dsui_2799 at 2970.263 kb on + strand at 2970.351 kb on - strand at 2970.396 kb on - strand at 2970.403 kb on - strand at 2970.436 kb on - strand at 2970.616 kb on - strand at 2970.630 kb on - strand at 2970.634 kb on - strand at 2970.635 kb on - strand at 2970.654 kb on + strand, within Dsui_2800 at 2970.662 kb on - strand at 2970.662 kb on - strand, within Dsui_2800 at 2970.678 kb on - strand, within Dsui_2800 at 2970.715 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.721 kb on - strand, within Dsui_2800 at 2970.728 kb on - strand at 2970.767 kb on + strand at 2970.842 kb on + strand, within Dsui_2800 at 2970.861 kb on - strand, within Dsui_2800 at 2971.005 kb on + strand, within Dsui_2800 at 2971.037 kb on + strand at 2971.054 kb on - strand, within Dsui_2800 at 2971.062 kb on + strand, within Dsui_2800 at 2971.138 kb on + strand at 2971.138 kb on - strand, within Dsui_2800 at 2971.166 kb on - strand, within Dsui_2800 at 2971.198 kb on + strand, within Dsui_2800 at 2971.227 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.232 kb on - strand, within Dsui_2800 at 2971.251 kb on + strand, within Dsui_2800 at 2971.441 kb on + strand, within Dsui_2800 at 2971.692 kb on - strand, within Dsui_2800 at 2971.830 kb on - strand at 2971.917 kb on + strand at 2971.917 kb on + strand at 2972.010 kb on - strand at 2972.011 kb on - strand at 2972.043 kb on + strand at 2972.063 kb on + strand at 2972.070 kb on + strand, within Dsui_2801 at 2972.070 kb on + strand, within Dsui_2801 at 2972.071 kb on - strand, within Dsui_2801 at 2972.080 kb on + strand at 2972.080 kb on + strand at 2972.088 kb on - strand, within Dsui_2801 at 2972.104 kb on - strand, within Dsui_2801 at 2972.182 kb on - strand, within Dsui_2801 at 2972.206 kb on - strand, within Dsui_2801 at 2972.246 kb on - strand, within Dsui_2801 at 2972.246 kb on - strand, within Dsui_2801 at 2972.246 kb on - strand, within Dsui_2801 at 2972.305 kb on - strand, within Dsui_2801 at 2972.442 kb on + strand, within Dsui_2801 at 2972.563 kb on + strand, within Dsui_2801 at 2972.571 kb on - strand, within Dsui_2801 at 2972.571 kb on - strand, within Dsui_2801 at 2972.672 kb on + strand at 2972.844 kb on + strand at 2972.862 kb on - strand at 2972.903 kb on - strand at 2972.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,969,555 - Dsui_2799 0.53 +0.4 2,969,563 + -0.5 2,969,694 + -2.6 2,969,868 - Dsui_2799 0.68 -4.4 2,970,108 - Dsui_2799 0.80 -3.1 2,970,263 + -3.0 2,970,351 - -1.6 2,970,396 - -5.0 2,970,403 - -2.6 2,970,436 - +0.3 2,970,616 - -2.2 2,970,630 - -3.3 2,970,634 - -0.8 2,970,635 - -3.6 2,970,654 + Dsui_2800 0.10 -2.5 2,970,662 - -3.2 2,970,662 - Dsui_2800 0.11 -0.7 2,970,678 - Dsui_2800 0.12 -2.4 2,970,715 - Dsui_2800 0.15 -1.5 2,970,721 - Dsui_2800 0.15 -1.2 2,970,721 - Dsui_2800 0.15 -3.4 2,970,721 - Dsui_2800 0.15 -1.8 2,970,728 - -2.3 2,970,767 + -0.3 2,970,842 + Dsui_2800 0.23 -1.7 2,970,861 - Dsui_2800 0.25 -1.4 2,971,005 + Dsui_2800 0.35 -2.8 2,971,037 + -3.2 2,971,054 - Dsui_2800 0.38 -1.1 2,971,062 + Dsui_2800 0.39 -2.5 2,971,138 + -2.0 2,971,138 - Dsui_2800 0.44 -1.0 2,971,166 - Dsui_2800 0.46 -4.2 2,971,198 + Dsui_2800 0.48 -4.4 2,971,227 - Dsui_2800 0.50 -1.5 2,971,232 - Dsui_2800 0.50 -2.5 2,971,232 - Dsui_2800 0.50 +0.3 2,971,232 - Dsui_2800 0.50 +0.1 2,971,251 + Dsui_2800 0.52 -2.4 2,971,441 + Dsui_2800 0.65 -2.1 2,971,692 - Dsui_2800 0.82 -2.2 2,971,830 - -1.4 2,971,917 + -0.9 2,971,917 + -1.1 2,972,010 - -4.1 2,972,011 - -0.8 2,972,043 + -2.0 2,972,063 + -1.8 2,972,070 + Dsui_2801 0.12 -3.7 2,972,070 + Dsui_2801 0.12 -2.7 2,972,071 - Dsui_2801 0.12 +4.9 2,972,080 + -3.3 2,972,080 + -2.9 2,972,088 - Dsui_2801 0.14 -1.5 2,972,104 - Dsui_2801 0.16 -1.1 2,972,182 - Dsui_2801 0.24 -1.7 2,972,206 - Dsui_2801 0.26 -0.8 2,972,246 - Dsui_2801 0.30 -2.1 2,972,246 - Dsui_2801 0.30 -1.5 2,972,246 - Dsui_2801 0.30 -1.2 2,972,305 - Dsui_2801 0.36 -2.3 2,972,442 + Dsui_2801 0.50 -4.0 2,972,563 + Dsui_2801 0.62 -3.0 2,972,571 - Dsui_2801 0.63 -2.7 2,972,571 - Dsui_2801 0.63 -0.8 2,972,672 + -2.0 2,972,844 + -0.8 2,972,862 - -0.5 2,972,903 - -4.3 2,972,918 - -0.7
Or see this region's nucleotide sequence