Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2675 and Dsui_2676 overlap by 1 nucleotides Dsui_2676 and Dsui_2677 are separated by 199 nucleotides Dsui_2677 and Dsui_2678 are separated by 85 nucleotides
Dsui_2675: Dsui_2675 - SsrA-binding protein, at 2,826,955 to 2,827,401
_2675
Dsui_2676: Dsui_2676 - putative membrane protein, at 2,827,401 to 2,828,021
_2676
Dsui_2677: Dsui_2677 - phosphoenolpyruvate synthase, at 2,828,221 to 2,830,596
_2677
Dsui_2678: Dsui_2678 - hypothetical protein, at 2,830,682 to 2,831,524
_2678
Position (kb)
2828
2829
2830
2831 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2827.403 kb on - strand at 2827.426 kb on - strand at 2827.429 kb on - strand at 2827.439 kb on - strand at 2827.530 kb on + strand, within Dsui_2676 at 2827.598 kb on - strand, within Dsui_2676 at 2827.612 kb on - strand, within Dsui_2676 at 2827.995 kb on - strand at 2828.010 kb on + strand at 2828.018 kb on - strand at 2828.076 kb on + strand at 2828.125 kb on + strand at 2828.133 kb on - strand at 2828.191 kb on + strand at 2830.644 kb on - strand at 2830.649 kb on + strand at 2830.649 kb on + strand at 2830.657 kb on - strand at 2830.657 kb on - strand at 2830.686 kb on + strand at 2830.766 kb on - strand at 2830.772 kb on - strand, within Dsui_2678 at 2830.776 kb on - strand at 2830.783 kb on + strand, within Dsui_2678 at 2830.783 kb on + strand, within Dsui_2678 at 2830.787 kb on - strand, within Dsui_2678 at 2830.791 kb on - strand at 2830.798 kb on + strand, within Dsui_2678 at 2830.804 kb on - strand at 2830.843 kb on - strand, within Dsui_2678 at 2830.847 kb on - strand, within Dsui_2678 at 2830.887 kb on + strand, within Dsui_2678 at 2830.920 kb on + strand, within Dsui_2678 at 2830.948 kb on + strand, within Dsui_2678 at 2830.980 kb on + strand, within Dsui_2678 at 2830.988 kb on - strand, within Dsui_2678 at 2831.028 kb on + strand, within Dsui_2678 at 2831.277 kb on + strand, within Dsui_2678 at 2831.406 kb on - strand at 2831.442 kb on + strand at 2831.442 kb on + strand at 2831.450 kb on - strand at 2831.540 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,827,403 - +0.2 2,827,426 - +1.8 2,827,429 - +1.0 2,827,439 - +0.6 2,827,530 + Dsui_2676 0.21 +2.0 2,827,598 - Dsui_2676 0.32 +2.0 2,827,612 - Dsui_2676 0.34 +0.3 2,827,995 - +0.2 2,828,010 + +0.6 2,828,018 - +0.7 2,828,076 + +0.7 2,828,125 + +0.5 2,828,133 - +1.5 2,828,191 + -0.1 2,830,644 - -1.8 2,830,649 + -2.2 2,830,649 + -0.8 2,830,657 - +1.2 2,830,657 - +0.2 2,830,686 + +0.4 2,830,766 - -3.7 2,830,772 - Dsui_2678 0.11 -3.3 2,830,776 - -0.2 2,830,783 + Dsui_2678 0.12 +1.6 2,830,783 + Dsui_2678 0.12 +1.5 2,830,787 - Dsui_2678 0.12 -1.0 2,830,791 - -3.3 2,830,798 + Dsui_2678 0.14 +2.2 2,830,804 - +0.2 2,830,843 - Dsui_2678 0.19 -0.1 2,830,847 - Dsui_2678 0.20 -1.7 2,830,887 + Dsui_2678 0.24 -3.5 2,830,920 + Dsui_2678 0.28 -1.8 2,830,948 + Dsui_2678 0.32 +0.2 2,830,980 + Dsui_2678 0.35 -0.5 2,830,988 - Dsui_2678 0.36 -0.6 2,831,028 + Dsui_2678 0.41 +0.3 2,831,277 + Dsui_2678 0.71 +0.0 2,831,406 - -1.9 2,831,442 + -1.0 2,831,442 + -0.8 2,831,450 - -2.7 2,831,540 + +1.1
Or see this region's nucleotide sequence