Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2228 and Dsui_2229 are separated by 70 nucleotides Dsui_2229 and Dsui_2230 are separated by 95 nucleotides
Dsui_2228: Dsui_2228 - Zn-dependent alcohol dehydrogenase, at 2,368,812 to 2,369,834
_2228
Dsui_2229: Dsui_2229 - transcriptional regulator, at 2,369,905 to 2,370,780
_2229
Dsui_2230: Dsui_2230 - conserved hypothetical integral membrane protein, at 2,370,876 to 2,371,910
_2230
Position (kb)
2369
2370
2371 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2368.975 kb on - strand, within Dsui_2228 at 2368.992 kb on - strand at 2369.084 kb on - strand at 2369.142 kb on - strand at 2369.142 kb on - strand at 2369.222 kb on + strand at 2369.260 kb on + strand at 2369.299 kb on - strand, within Dsui_2228 at 2369.356 kb on + strand at 2369.356 kb on - strand, within Dsui_2228 at 2369.356 kb on - strand, within Dsui_2228 at 2369.356 kb on - strand, within Dsui_2228 at 2369.357 kb on + strand, within Dsui_2228 at 2369.358 kb on + strand at 2369.358 kb on + strand at 2369.366 kb on - strand, within Dsui_2228 at 2369.374 kb on - strand at 2369.413 kb on + strand at 2369.416 kb on + strand at 2369.477 kb on + strand at 2369.485 kb on - strand at 2369.524 kb on + strand at 2369.606 kb on - strand at 2369.636 kb on + strand at 2369.668 kb on - strand at 2369.736 kb on - strand at 2369.736 kb on - strand at 2369.738 kb on + strand at 2369.738 kb on + strand at 2370.078 kb on + strand at 2370.078 kb on + strand at 2370.110 kb on + strand at 2370.118 kb on - strand, within Dsui_2229 at 2370.118 kb on - strand, within Dsui_2229 at 2370.118 kb on - strand, within Dsui_2229 at 2370.163 kb on - strand, within Dsui_2229 at 2370.168 kb on - strand, within Dsui_2229 at 2370.284 kb on - strand, within Dsui_2229 at 2370.292 kb on - strand at 2370.396 kb on - strand, within Dsui_2229 at 2370.401 kb on - strand, within Dsui_2229 at 2370.484 kb on + strand at 2370.510 kb on - strand, within Dsui_2229 at 2370.515 kb on - strand, within Dsui_2229 at 2370.625 kb on - strand, within Dsui_2229 at 2370.642 kb on - strand, within Dsui_2229 at 2370.672 kb on - strand, within Dsui_2229 at 2370.672 kb on - strand, within Dsui_2229 at 2370.691 kb on + strand at 2371.072 kb on + strand, within Dsui_2230 at 2371.085 kb on - strand at 2371.214 kb on - strand at 2371.247 kb on - strand at 2371.247 kb on - strand at 2371.468 kb on + strand at 2371.527 kb on - strand at 2371.672 kb on - strand at 2371.680 kb on + strand at 2371.759 kb on - strand, within Dsui_2230 at 2371.769 kb on - strand, within Dsui_2230
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,368,975 - Dsui_2228 0.16 -1.1 2,368,992 - -1.3 2,369,084 - -1.8 2,369,142 - -1.7 2,369,142 - -2.2 2,369,222 + -0.9 2,369,260 + -0.4 2,369,299 - Dsui_2228 0.48 -0.2 2,369,356 + -1.5 2,369,356 - Dsui_2228 0.53 -3.7 2,369,356 - Dsui_2228 0.53 -0.5 2,369,356 - Dsui_2228 0.53 -0.6 2,369,357 + Dsui_2228 0.53 -1.1 2,369,358 + -3.3 2,369,358 + +1.2 2,369,366 - Dsui_2228 0.54 -2.3 2,369,374 - +1.1 2,369,413 + -0.3 2,369,416 + -1.7 2,369,477 + -3.2 2,369,485 - -2.6 2,369,524 + -1.5 2,369,606 - +0.6 2,369,636 + +1.8 2,369,668 - -3.1 2,369,736 - -2.1 2,369,736 - +0.7 2,369,738 + -0.6 2,369,738 + -0.9 2,370,078 + -3.6 2,370,078 + +1.1 2,370,110 + +2.1 2,370,118 - Dsui_2229 0.24 +1.3 2,370,118 - Dsui_2229 0.24 +1.3 2,370,118 - Dsui_2229 0.24 -1.1 2,370,163 - Dsui_2229 0.29 +2.4 2,370,168 - Dsui_2229 0.30 +0.8 2,370,284 - Dsui_2229 0.43 +0.6 2,370,292 - -0.6 2,370,396 - Dsui_2229 0.56 +0.5 2,370,401 - Dsui_2229 0.57 -0.2 2,370,484 + -2.5 2,370,510 - Dsui_2229 0.69 -0.1 2,370,515 - Dsui_2229 0.70 +0.5 2,370,625 - Dsui_2229 0.82 +0.9 2,370,642 - Dsui_2229 0.84 +1.6 2,370,672 - Dsui_2229 0.88 +0.1 2,370,672 - Dsui_2229 0.88 +1.4 2,370,691 + -2.6 2,371,072 + Dsui_2230 0.19 +0.9 2,371,085 - -2.7 2,371,214 - +0.9 2,371,247 - -3.2 2,371,247 - -1.9 2,371,468 + -3.5 2,371,527 - -4.3 2,371,672 - +2.1 2,371,680 + -0.8 2,371,759 - Dsui_2230 0.85 +0.7 2,371,769 - Dsui_2230 0.86 -1.2
Or see this region's nucleotide sequence