Strain Fitness in Dechlorosoma suillum PS around Dsui_2150

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2149 and Dsui_2150 are separated by 4 nucleotidesDsui_2150 and Dsui_2151 overlap by 1 nucleotidesDsui_2151 and Dsui_2152 are separated by 30 nucleotides Dsui_2149: Dsui_2149 - DNA helicase, Rad3, at 2,278,825 to 2,280,777 _2149 Dsui_2150: Dsui_2150 - hypothetical protein, at 2,280,782 to 2,282,134 _2150 Dsui_2151: Dsui_2151 - molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 2,282,134 to 2,282,655 _2151 Dsui_2152: Dsui_2152 - molybdenum cofactor synthesis domain protein, at 2,282,686 to 2,283,912 _2152 Position (kb) 2280 2281 2282 2283Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2279.805 kb on + strand, within Dsui_2149at 2279.805 kb on + strand, within Dsui_2149at 2279.805 kb on + strand, within Dsui_2149at 2279.848 kb on - strandat 2279.918 kb on + strand, within Dsui_2149at 2279.918 kb on + strand, within Dsui_2149at 2279.925 kb on + strand, within Dsui_2149at 2280.019 kb on - strandat 2280.153 kb on - strandat 2280.353 kb on - strand, within Dsui_2149at 2280.464 kb on + strand, within Dsui_2149at 2280.576 kb on + strand, within Dsui_2149at 2280.654 kb on - strandat 2280.786 kb on - strandat 2280.868 kb on - strandat 2280.870 kb on + strandat 2280.881 kb on + strandat 2280.881 kb on + strandat 2280.889 kb on - strandat 2281.146 kb on + strand, within Dsui_2150at 2281.382 kb on + strand, within Dsui_2150at 2281.490 kb on + strand, within Dsui_2150at 2281.604 kb on - strand, within Dsui_2150at 2281.673 kb on - strandat 2281.924 kb on - strand, within Dsui_2150at 2281.986 kb on + strand, within Dsui_2150at 2282.126 kb on - strandat 2282.195 kb on + strand, within Dsui_2151at 2282.261 kb on + strand, within Dsui_2151at 2282.269 kb on - strand, within Dsui_2151at 2282.284 kb on - strand, within Dsui_2151at 2282.517 kb on + strand, within Dsui_2151at 2282.581 kb on - strand, within Dsui_2151at 2282.655 kb on - strandat 2282.763 kb on - strandat 2282.844 kb on + strand, within Dsui_2152at 2282.933 kb on + strand, within Dsui_2152at 2282.941 kb on - strand, within Dsui_2152at 2282.977 kb on + strand, within Dsui_2152at 2283.070 kb on - strand, within Dsui_2152

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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2,279,805 + Dsui_2149 0.50 +0.2
2,279,805 + Dsui_2149 0.50 -0.1
2,279,805 + Dsui_2149 0.50 -0.3
2,279,848 - -2.2
2,279,918 + Dsui_2149 0.56 -5.6
2,279,918 + Dsui_2149 0.56 -2.0
2,279,925 + Dsui_2149 0.56 -1.3
2,280,019 - -1.5
2,280,153 - +0.1
2,280,353 - Dsui_2149 0.78 -4.5
2,280,464 + Dsui_2149 0.84 -0.8
2,280,576 + Dsui_2149 0.90 +1.3
2,280,654 - -2.1
2,280,786 - -2.7
2,280,868 - -1.2
2,280,870 + -6.3
2,280,881 + -2.7
2,280,881 + -3.3
2,280,889 - -4.2
2,281,146 + Dsui_2150 0.27 -6.4
2,281,382 + Dsui_2150 0.44 -4.4
2,281,490 + Dsui_2150 0.52 -4.0
2,281,604 - Dsui_2150 0.61 -4.7
2,281,673 - -2.6
2,281,924 - Dsui_2150 0.84 -4.6
2,281,986 + Dsui_2150 0.89 -0.8
2,282,126 - -2.7
2,282,195 + Dsui_2151 0.12 -3.9
2,282,261 + Dsui_2151 0.24 -5.6
2,282,269 - Dsui_2151 0.26 -4.3
2,282,284 - Dsui_2151 0.29 -4.9
2,282,517 + Dsui_2151 0.73 -4.3
2,282,581 - Dsui_2151 0.86 -3.4
2,282,655 - -2.6
2,282,763 - -1.5
2,282,844 + Dsui_2152 0.13 -3.9
2,282,933 + Dsui_2152 0.20 -4.1
2,282,941 - Dsui_2152 0.21 -3.7
2,282,977 + Dsui_2152 0.24 -2.9
2,283,070 - Dsui_2152 0.31 -3.8

Or see this region's nucleotide sequence