Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1254 and Dsui_1255 are separated by 53 nucleotides Dsui_1255 and Dsui_1256 are separated by 4 nucleotides Dsui_1256 and Dsui_1257 are separated by 45 nucleotides
Dsui_1254: Dsui_1254 - TonB-dependent copper receptor, at 1,315,724 to 1,317,742
_1254
Dsui_1255: Dsui_1255 - mannose-6-phosphate isomerase, at 1,317,796 to 1,318,281
_1255
Dsui_1256: Dsui_1256 - hypothetical protein, at 1,318,286 to 1,318,540
_1256
Dsui_1257: Dsui_1257 - DNA-directed DNA polymerase III PolC, at 1,318,586 to 1,322,041
_1257
Position (kb)
1318
1319 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1317.309 kb on - strand, within Dsui_1254 at 1317.328 kb on - strand, within Dsui_1254 at 1317.390 kb on + strand, within Dsui_1254 at 1317.420 kb on - strand, within Dsui_1254 at 1317.427 kb on + strand, within Dsui_1254 at 1317.589 kb on - strand at 1317.589 kb on - strand at 1317.594 kb on - strand at 1317.599 kb on - strand at 1317.619 kb on + strand at 1317.627 kb on - strand at 1317.627 kb on - strand at 1317.645 kb on - strand at 1317.648 kb on + strand at 1317.763 kb on - strand at 1317.773 kb on - strand at 1317.823 kb on + strand at 1317.856 kb on - strand, within Dsui_1255 at 1317.916 kb on + strand, within Dsui_1255 at 1317.928 kb on + strand, within Dsui_1255 at 1317.936 kb on - strand, within Dsui_1255 at 1318.004 kb on - strand, within Dsui_1255 at 1318.025 kb on - strand, within Dsui_1255 at 1318.057 kb on + strand at 1318.083 kb on + strand, within Dsui_1255 at 1318.083 kb on - strand, within Dsui_1255 at 1318.125 kb on - strand, within Dsui_1255 at 1318.140 kb on - strand, within Dsui_1255 at 1318.151 kb on - strand, within Dsui_1255 at 1318.285 kb on - strand at 1318.315 kb on - strand, within Dsui_1256 at 1318.359 kb on - strand, within Dsui_1256 at 1318.488 kb on - strand, within Dsui_1256 at 1318.502 kb on - strand, within Dsui_1256 at 1318.549 kb on + strand at 1318.554 kb on + strand at 1318.557 kb on - strand at 1318.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 1,317,309 - Dsui_1254 0.79 -0.2 1,317,328 - Dsui_1254 0.79 -0.5 1,317,390 + Dsui_1254 0.83 +0.1 1,317,420 - Dsui_1254 0.84 +0.7 1,317,427 + Dsui_1254 0.84 +0.1 1,317,589 - +0.1 1,317,589 - +0.2 1,317,594 - -0.1 1,317,599 - -0.2 1,317,619 + -0.0 1,317,627 - -1.7 1,317,627 - -0.8 1,317,645 - +0.7 1,317,648 + +0.1 1,317,763 - +0.5 1,317,773 - -1.1 1,317,823 + -0.6 1,317,856 - Dsui_1255 0.12 +1.3 1,317,916 + Dsui_1255 0.25 -1.1 1,317,928 + Dsui_1255 0.27 +0.1 1,317,936 - Dsui_1255 0.29 +1.4 1,318,004 - Dsui_1255 0.43 +0.7 1,318,025 - Dsui_1255 0.47 +1.6 1,318,057 + +0.4 1,318,083 + Dsui_1255 0.59 -0.8 1,318,083 - Dsui_1255 0.59 +2.0 1,318,125 - Dsui_1255 0.68 +0.5 1,318,140 - Dsui_1255 0.71 +0.7 1,318,151 - Dsui_1255 0.73 +0.6 1,318,285 - +0.4 1,318,315 - Dsui_1256 0.11 +1.4 1,318,359 - Dsui_1256 0.29 +0.7 1,318,488 - Dsui_1256 0.79 +0.8 1,318,502 - Dsui_1256 0.85 +1.2 1,318,549 + +0.0 1,318,554 + -0.9 1,318,557 - +1.3 1,318,557 - -3.7
Or see this region's nucleotide sequence