Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0836 and Dsui_0837 are separated by 64 nucleotides Dsui_0837 and Dsui_0838 are separated by 77 nucleotides
Dsui_0836: Dsui_0836 - membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein, at 849,426 to 851,081
_0836
Dsui_0837: Dsui_0837 - tRNA modification GTPase TrmE, at 851,146 to 852,498
_0837
Dsui_0838: Dsui_0838 - hypothetical protein, at 852,576 to 853,673
_0838
Position (kb) 851
852
853 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 851.006 kb on + strand at 851.075 kb on + strand at 851.075 kb on + strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.129 kb on + strand at 851.217 kb on - strand at 851.348 kb on + strand, within Dsui_0837 at 851.351 kb on - strand at 851.394 kb on + strand at 851.438 kb on + strand, within Dsui_0837 at 851.442 kb on + strand, within Dsui_0837 at 851.446 kb on - strand at 851.520 kb on + strand, within Dsui_0837 at 851.660 kb on - strand at 851.671 kb on - strand at 851.803 kb on + strand, within Dsui_0837 at 851.839 kb on - strand at 851.839 kb on - strand, within Dsui_0837 at 851.907 kb on + strand, within Dsui_0837 at 851.977 kb on + strand, within Dsui_0837 at 852.251 kb on + strand, within Dsui_0837 at 852.441 kb on + strand at 852.477 kb on - strand at 852.568 kb on + strand at 852.568 kb on - strand at 852.597 kb on - strand at 852.609 kb on - strand at 852.646 kb on - strand at 852.727 kb on - strand, within Dsui_0838 at 852.771 kb on - strand at 852.774 kb on + strand, within Dsui_0838 at 852.860 kb on + strand at 852.860 kb on + strand, within Dsui_0838 at 852.929 kb on + strand, within Dsui_0838 at 852.950 kb on + strand at 853.004 kb on + strand at 853.058 kb on - strand at 853.147 kb on + strand, within Dsui_0838 at 853.147 kb on + strand, within Dsui_0838 at 853.188 kb on - strand, within Dsui_0838 at 853.226 kb on - strand, within Dsui_0838 at 853.241 kb on - strand at 853.243 kb on + strand, within Dsui_0838 at 853.244 kb on + strand, within Dsui_0838 at 853.252 kb on - strand at 853.253 kb on + strand, within Dsui_0838 at 853.263 kb on + strand, within Dsui_0838 at 853.289 kb on - strand, within Dsui_0838 at 853.296 kb on - strand at 853.425 kb on + strand, within Dsui_0838 at 853.460 kb on + strand, within Dsui_0838 at 853.485 kb on + strand, within Dsui_0838 at 853.485 kb on + strand, within Dsui_0838 at 853.488 kb on - strand, within Dsui_0838
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 851,006 + -3.6 851,075 + +0.6 851,075 + +1.2 851,083 - -1.4 851,083 - -0.1 851,083 - -1.6 851,083 - -0.8 851,129 + +1.2 851,217 - -1.1 851,348 + Dsui_0837 0.15 -1.4 851,351 - -3.1 851,394 + +0.7 851,438 + Dsui_0837 0.22 -2.5 851,442 + Dsui_0837 0.22 -2.5 851,446 - -3.8 851,520 + Dsui_0837 0.28 -4.5 851,660 - -4.8 851,671 - -3.5 851,803 + Dsui_0837 0.49 -2.0 851,839 - -4.5 851,839 - Dsui_0837 0.51 -5.7 851,907 + Dsui_0837 0.56 -4.1 851,977 + Dsui_0837 0.61 -3.1 852,251 + Dsui_0837 0.82 -2.8 852,441 + -2.0 852,477 - -4.7 852,568 + +0.7 852,568 - -1.3 852,597 - +0.2 852,609 - +0.2 852,646 - +2.2 852,727 - Dsui_0838 0.14 -0.9 852,771 - -0.5 852,774 + Dsui_0838 0.18 -0.7 852,860 + -1.0 852,860 + Dsui_0838 0.26 +0.1 852,929 + Dsui_0838 0.32 +0.7 852,950 + +0.1 853,004 + -1.0 853,058 - +0.2 853,147 + Dsui_0838 0.52 -0.2 853,147 + Dsui_0838 0.52 +0.4 853,188 - Dsui_0838 0.56 +0.3 853,226 - Dsui_0838 0.59 -0.9 853,241 - +1.1 853,243 + Dsui_0838 0.61 +0.5 853,244 + Dsui_0838 0.61 +0.6 853,252 - +0.4 853,253 + Dsui_0838 0.62 -3.4 853,263 + Dsui_0838 0.63 -0.8 853,289 - Dsui_0838 0.65 +0.3 853,296 - -1.5 853,425 + Dsui_0838 0.77 +0.8 853,460 + Dsui_0838 0.81 -0.9 853,485 + Dsui_0838 0.83 +0.2 853,485 + Dsui_0838 0.83 +0.4 853,488 - Dsui_0838 0.83 -0.1
Or see this region's nucleotide sequence