Strain Fitness in Dechlorosoma suillum PS around Dsui_0734

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0731 and Dsui_0732 are separated by 12 nucleotidesDsui_0732 and Dsui_0733 are separated by 12 nucleotidesDsui_0733 and Dsui_0734 overlap by 4 nucleotidesDsui_0734 and Dsui_0735 are separated by 265 nucleotidesDsui_0735 and Dsui_0736 are separated by 93 nucleotides Dsui_0731: Dsui_0731 - microcystin-dependent protein, at 729,312 to 729,833 _0731 Dsui_0732: Dsui_0732 - microcystin-dependent protein, at 729,846 to 730,379 _0732 Dsui_0733: Dsui_0733 - hypothetical protein, at 730,392 to 730,703 _0733 Dsui_0734: Dsui_0734 - acetyltransferase, at 730,700 to 731,239 _0734 Dsui_0735: Dsui_0735 - putative membrane protein, at 731,505 to 731,984 _0735 Dsui_0736: Dsui_0736 - FAD/FMN-dependent dehydrogenase, at 732,078 to 735,956 _0736 Position (kb) 730 731 732Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 729.728 kb on - strand, within Dsui_0731at 729.760 kb on - strand, within Dsui_0731at 729.772 kb on + strand, within Dsui_0731at 729.777 kb on + strand, within Dsui_0731at 729.837 kb on + strandat 729.906 kb on - strand, within Dsui_0732at 730.012 kb on + strand, within Dsui_0732at 730.020 kb on - strand, within Dsui_0732at 730.097 kb on + strand, within Dsui_0732at 730.131 kb on + strandat 730.134 kb on - strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.160 kb on - strand, within Dsui_0732at 730.196 kb on - strand, within Dsui_0732at 730.204 kb on - strand, within Dsui_0732at 730.211 kb on + strand, within Dsui_0732at 730.219 kb on - strand, within Dsui_0732at 730.223 kb on - strand, within Dsui_0732at 730.316 kb on + strand, within Dsui_0732at 730.316 kb on + strandat 730.318 kb on + strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.325 kb on - strand, within Dsui_0732at 730.333 kb on + strandat 730.398 kb on - strandat 730.498 kb on - strand, within Dsui_0733at 730.524 kb on - strand, within Dsui_0733at 730.551 kb on + strand, within Dsui_0733at 730.559 kb on - strand, within Dsui_0733at 730.607 kb on - strand, within Dsui_0733at 730.644 kb on + strand, within Dsui_0733at 730.657 kb on + strandat 730.707 kb on + strandat 730.707 kb on + strandat 730.728 kb on + strandat 730.865 kb on - strand, within Dsui_0734at 731.030 kb on - strand, within Dsui_0734at 731.080 kb on - strand, within Dsui_0734at 731.202 kb on - strandat 731.202 kb on - strandat 731.242 kb on - strandat 731.439 kb on + strandat 731.441 kb on - strandat 731.441 kb on - strandat 731.451 kb on - strandat 731.458 kb on + strandat 731.458 kb on + strandat 731.466 kb on - strandat 731.466 kb on - strandat 731.466 kb on - strandat 731.487 kb on + strandat 731.493 kb on + strandat 731.495 kb on - strandat 731.514 kb on + strandat 731.527 kb on - strandat 731.527 kb on - strandat 731.527 kb on - strandat 731.540 kb on - strandat 731.556 kb on - strand, within Dsui_0735at 731.567 kb on - strand, within Dsui_0735at 731.663 kb on - strand, within Dsui_0735at 731.675 kb on - strand, within Dsui_0735at 731.749 kb on - strand, within Dsui_0735at 731.802 kb on - strand, within Dsui_0735at 731.821 kb on + strand, within Dsui_0735at 731.835 kb on - strand, within Dsui_0735at 731.913 kb on - strand, within Dsui_0735at 731.915 kb on - strand, within Dsui_0735at 732.000 kb on + strandat 732.007 kb on + strandat 732.008 kb on - strandat 732.014 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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729,728 - Dsui_0731 0.80 -2.7
729,760 - Dsui_0731 0.86 -1.1
729,772 + Dsui_0731 0.88 -0.1
729,777 + Dsui_0731 0.89 -0.4
729,837 + -0.6
729,906 - Dsui_0732 0.11 +1.2
730,012 + Dsui_0732 0.31 -0.3
730,020 - Dsui_0732 0.33 +0.2
730,097 + Dsui_0732 0.47 -1.5
730,131 + -2.3
730,134 - Dsui_0732 0.54 +0.5
730,152 + Dsui_0732 0.57 +0.7
730,152 + Dsui_0732 0.57 -0.9
730,160 - Dsui_0732 0.59 +1.3
730,196 - Dsui_0732 0.66 -3.6
730,204 - Dsui_0732 0.67 -0.5
730,211 + Dsui_0732 0.68 +2.2
730,219 - Dsui_0732 0.70 +0.8
730,223 - Dsui_0732 0.71 +0.3
730,316 + Dsui_0732 0.88 -1.0
730,316 + -3.6
730,318 + Dsui_0732 0.88 +0.1
730,324 - Dsui_0732 0.90 -0.0
730,324 - Dsui_0732 0.90 -0.8
730,324 - Dsui_0732 0.90 -1.2
730,325 - Dsui_0732 0.90 -0.5
730,333 + +0.9
730,398 - +0.0
730,498 - Dsui_0733 0.34 -1.2
730,524 - Dsui_0733 0.42 -0.4
730,551 + Dsui_0733 0.51 -3.1
730,559 - Dsui_0733 0.54 +0.6
730,607 - Dsui_0733 0.69 -2.8
730,644 + Dsui_0733 0.81 +0.0
730,657 + -2.2
730,707 + -0.8
730,707 + -0.6
730,728 + -0.0
730,865 - Dsui_0734 0.31 -1.0
731,030 - Dsui_0734 0.61 -2.1
731,080 - Dsui_0734 0.70 -1.4
731,202 - +1.1
731,202 - +0.1
731,242 - +0.2
731,439 + -1.1
731,441 - -0.9
731,441 - -0.8
731,451 - -0.5
731,458 + +2.3
731,458 + -2.4
731,466 - +0.5
731,466 - +0.2
731,466 - -0.5
731,487 + -0.4
731,493 + -0.3
731,495 - +1.3
731,514 + +0.5
731,527 - -1.2
731,527 - -0.6
731,527 - -2.1
731,540 - -4.8
731,556 - Dsui_0735 0.11 -2.6
731,567 - Dsui_0735 0.13 -0.5
731,663 - Dsui_0735 0.33 -1.4
731,675 - Dsui_0735 0.35 -0.7
731,749 - Dsui_0735 0.51 -0.2
731,802 - Dsui_0735 0.62 -0.4
731,821 + Dsui_0735 0.66 +0.7
731,835 - Dsui_0735 0.69 +0.0
731,913 - Dsui_0735 0.85 -0.9
731,915 - Dsui_0735 0.85 -0.6
732,000 + +1.2
732,007 + +0.7
732,008 - +0.4
732,014 - -0.8

Or see this region's nucleotide sequence