Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0083 and Dsui_0084 are separated by 10 nucleotides Dsui_0084 and Dsui_0085 are separated by 303 nucleotides
Dsui_0083: Dsui_0083 - UDP-N-acetylglucosamine 4,6-dehydratase, at 80,256 to 81,254
_0083
Dsui_0084: Dsui_0084 - ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain, at 81,265 to 83,040
_0084
Dsui_0085: Dsui_0085 - GDP-mannose 4,6-dehydratase, at 83,344 to 84,435
_0085
Position (kb)
81
82
83
84 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 80.295 kb on + strand at 80.298 kb on - strand at 80.344 kb on - strand at 80.346 kb on + strand at 80.346 kb on + strand at 80.353 kb on - strand at 80.354 kb on - strand at 80.354 kb on - strand at 80.413 kb on + strand, within Dsui_0083 at 80.422 kb on + strand, within Dsui_0083 at 80.459 kb on - strand, within Dsui_0083 at 80.470 kb on + strand, within Dsui_0083 at 80.472 kb on + strand, within Dsui_0083 at 80.472 kb on - strand, within Dsui_0083 at 80.534 kb on - strand, within Dsui_0083 at 80.550 kb on - strand, within Dsui_0083 at 80.561 kb on + strand, within Dsui_0083 at 80.615 kb on + strand, within Dsui_0083 at 80.628 kb on - strand, within Dsui_0083 at 80.628 kb on - strand, within Dsui_0083 at 80.630 kb on + strand, within Dsui_0083 at 80.630 kb on + strand, within Dsui_0083 at 80.642 kb on + strand, within Dsui_0083 at 80.642 kb on + strand, within Dsui_0083 at 80.664 kb on + strand, within Dsui_0083 at 80.690 kb on + strand, within Dsui_0083 at 80.708 kb on - strand, within Dsui_0083 at 80.730 kb on - strand, within Dsui_0083 at 80.845 kb on + strand, within Dsui_0083 at 80.860 kb on - strand, within Dsui_0083 at 80.863 kb on + strand, within Dsui_0083 at 80.863 kb on + strand, within Dsui_0083 at 80.871 kb on - strand, within Dsui_0083 at 80.887 kb on + strand, within Dsui_0083 at 80.888 kb on - strand, within Dsui_0083 at 80.931 kb on - strand, within Dsui_0083 at 80.976 kb on + strand, within Dsui_0083 at 80.976 kb on + strand, within Dsui_0083 at 80.979 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.986 kb on + strand, within Dsui_0083 at 81.010 kb on + strand, within Dsui_0083 at 81.010 kb on + strand, within Dsui_0083 at 81.033 kb on + strand, within Dsui_0083 at 81.166 kb on + strand at 81.172 kb on + strand at 81.174 kb on - strand at 81.174 kb on - strand at 81.251 kb on + strand at 81.290 kb on - strand at 81.322 kb on - strand at 81.374 kb on - strand at 81.392 kb on + strand at 81.395 kb on + strand at 81.403 kb on - strand at 81.490 kb on - strand, within Dsui_0084 at 81.490 kb on - strand, within Dsui_0084 at 81.492 kb on - strand, within Dsui_0084 at 81.492 kb on - strand, within Dsui_0084 at 81.583 kb on - strand, within Dsui_0084 at 81.712 kb on - strand, within Dsui_0084 at 81.765 kb on + strand, within Dsui_0084 at 81.799 kb on + strand, within Dsui_0084 at 81.817 kb on + strand, within Dsui_0084 at 81.825 kb on - strand, within Dsui_0084 at 81.859 kb on - strand, within Dsui_0084 at 81.893 kb on + strand, within Dsui_0084 at 81.976 kb on + strand, within Dsui_0084 at 81.998 kb on + strand, within Dsui_0084 at 82.012 kb on - strand, within Dsui_0084 at 82.115 kb on + strand, within Dsui_0084 at 82.178 kb on - strand, within Dsui_0084 at 82.183 kb on - strand, within Dsui_0084 at 82.188 kb on + strand, within Dsui_0084 at 82.207 kb on + strand, within Dsui_0084 at 82.258 kb on + strand, within Dsui_0084 at 82.258 kb on + strand, within Dsui_0084 at 82.266 kb on - strand, within Dsui_0084 at 82.299 kb on - strand, within Dsui_0084 at 82.306 kb on + strand, within Dsui_0084 at 82.314 kb on - strand, within Dsui_0084 at 82.315 kb on - strand, within Dsui_0084 at 82.352 kb on + strand, within Dsui_0084 at 82.387 kb on - strand, within Dsui_0084 at 82.484 kb on + strand, within Dsui_0084 at 82.493 kb on - strand, within Dsui_0084 at 82.494 kb on + strand, within Dsui_0084 at 82.499 kb on + strand, within Dsui_0084 at 82.502 kb on - strand, within Dsui_0084 at 82.533 kb on + strand, within Dsui_0084 at 82.541 kb on - strand, within Dsui_0084 at 82.605 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.689 kb on + strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.748 kb on - strand, within Dsui_0084 at 82.782 kb on + strand, within Dsui_0084 at 82.787 kb on - strand, within Dsui_0084 at 82.789 kb on + strand, within Dsui_0084 at 82.812 kb on + strand, within Dsui_0084 at 82.816 kb on - strand, within Dsui_0084 at 82.840 kb on - strand, within Dsui_0084 at 82.910 kb on + strand at 82.927 kb on - strand at 82.937 kb on - strand at 82.937 kb on - strand at 82.945 kb on - strand at 82.968 kb on - strand at 83.002 kb on - strand at 83.008 kb on + strand at 83.034 kb on + strand at 83.116 kb on - strand at 83.133 kb on - strand at 83.150 kb on - strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.202 kb on - strand at 83.263 kb on + strand at 83.290 kb on + strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.303 kb on - strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.371 kb on - strand at 83.371 kb on - strand at 83.405 kb on + strand at 83.407 kb on + strand at 83.407 kb on + strand at 83.413 kb on - strand at 83.413 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.426 kb on + strand at 83.535 kb on - strand, within Dsui_0085 at 83.577 kb on - strand, within Dsui_0085 at 83.607 kb on - strand, within Dsui_0085 at 83.630 kb on - strand, within Dsui_0085 at 83.654 kb on + strand, within Dsui_0085 at 83.655 kb on - strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.665 kb on - strand, within Dsui_0085 at 83.667 kb on - strand, within Dsui_0085 at 83.747 kb on + strand, within Dsui_0085 at 83.762 kb on + strand, within Dsui_0085 at 83.773 kb on + strand, within Dsui_0085 at 83.795 kb on + strand, within Dsui_0085 at 83.796 kb on - strand, within Dsui_0085 at 83.802 kb on + strand, within Dsui_0085 at 83.804 kb on - strand, within Dsui_0085 at 83.864 kb on - strand, within Dsui_0085 at 83.885 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.894 kb on - strand, within Dsui_0085 at 83.895 kb on + strand, within Dsui_0085 at 83.901 kb on - strand, within Dsui_0085 at 83.916 kb on - strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.958 kb on + strand at 83.958 kb on + strand, within Dsui_0085 at 83.964 kb on - strand, within Dsui_0085 at 83.966 kb on - strand, within Dsui_0085 at 84.009 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 80,295 + -3.2 80,298 - +0.0 80,344 - +0.6 80,346 + -2.4 80,346 + -1.1 80,353 - -1.3 80,354 - -0.4 80,354 - -1.1 80,413 + Dsui_0083 0.16 -1.0 80,422 + Dsui_0083 0.17 -0.7 80,459 - Dsui_0083 0.20 -0.7 80,470 + Dsui_0083 0.21 -2.3 80,472 + Dsui_0083 0.22 -1.4 80,472 - Dsui_0083 0.22 -0.6 80,534 - Dsui_0083 0.28 -0.2 80,550 - Dsui_0083 0.29 -1.2 80,561 + Dsui_0083 0.31 -1.7 80,615 + Dsui_0083 0.36 -1.0 80,628 - Dsui_0083 0.37 -0.6 80,628 - Dsui_0083 0.37 -1.3 80,630 + Dsui_0083 0.37 -3.0 80,630 + Dsui_0083 0.37 -1.0 80,642 + Dsui_0083 0.39 -1.6 80,642 + Dsui_0083 0.39 -0.8 80,664 + Dsui_0083 0.41 +0.3 80,690 + Dsui_0083 0.43 -1.3 80,708 - Dsui_0083 0.45 -2.6 80,730 - Dsui_0083 0.47 +0.1 80,845 + Dsui_0083 0.59 -1.3 80,860 - Dsui_0083 0.60 -1.1 80,863 + Dsui_0083 0.61 -0.3 80,863 + Dsui_0083 0.61 +0.3 80,871 - Dsui_0083 0.62 -0.6 80,887 + Dsui_0083 0.63 -2.4 80,888 - Dsui_0083 0.63 +1.5 80,931 - Dsui_0083 0.68 +1.5 80,976 + Dsui_0083 0.72 -0.3 80,976 + Dsui_0083 0.72 -1.4 80,979 - Dsui_0083 0.72 -0.3 80,984 - Dsui_0083 0.73 -3.3 80,984 - Dsui_0083 0.73 -0.8 80,984 - Dsui_0083 0.73 -0.3 80,984 - Dsui_0083 0.73 -0.1 80,984 - Dsui_0083 0.73 +0.5 80,986 + Dsui_0083 0.73 -1.3 81,010 + Dsui_0083 0.75 -3.2 81,010 + Dsui_0083 0.75 -2.2 81,033 + Dsui_0083 0.78 -0.3 81,166 + -1.5 81,172 + -1.3 81,174 - -0.5 81,174 - -0.1 81,251 + -1.5 81,290 - +1.4 81,322 - +0.9 81,374 - -0.9 81,392 + -0.9 81,395 + -2.7 81,403 - -1.5 81,490 - Dsui_0084 0.13 -0.8 81,490 - Dsui_0084 0.13 -3.1 81,492 - Dsui_0084 0.13 -2.4 81,492 - Dsui_0084 0.13 -0.8 81,583 - Dsui_0084 0.18 -1.3 81,712 - Dsui_0084 0.25 -0.9 81,765 + Dsui_0084 0.28 -1.8 81,799 + Dsui_0084 0.30 +0.3 81,817 + Dsui_0084 0.31 -3.7 81,825 - Dsui_0084 0.32 -0.3 81,859 - Dsui_0084 0.33 +0.1 81,893 + Dsui_0084 0.35 -3.1 81,976 + Dsui_0084 0.40 -0.9 81,998 + Dsui_0084 0.41 -1.7 82,012 - Dsui_0084 0.42 +0.2 82,115 + Dsui_0084 0.48 -0.8 82,178 - Dsui_0084 0.51 -1.7 82,183 - Dsui_0084 0.52 -3.2 82,188 + Dsui_0084 0.52 -4.2 82,207 + Dsui_0084 0.53 -0.3 82,258 + Dsui_0084 0.56 -1.3 82,258 + Dsui_0084 0.56 -1.0 82,266 - Dsui_0084 0.56 -1.8 82,299 - Dsui_0084 0.58 -3.9 82,306 + Dsui_0084 0.59 -5.3 82,314 - Dsui_0084 0.59 -1.8 82,315 - Dsui_0084 0.59 -2.8 82,352 + Dsui_0084 0.61 -2.4 82,387 - Dsui_0084 0.63 -2.0 82,484 + Dsui_0084 0.69 -2.5 82,493 - Dsui_0084 0.69 -3.0 82,494 + Dsui_0084 0.69 -3.1 82,499 + Dsui_0084 0.69 -5.2 82,502 - Dsui_0084 0.70 -2.1 82,533 + Dsui_0084 0.71 -2.4 82,541 - Dsui_0084 0.72 -1.6 82,605 - Dsui_0084 0.75 -0.7 82,654 - Dsui_0084 0.78 -0.5 82,654 - Dsui_0084 0.78 -3.0 82,654 - Dsui_0084 0.78 -1.9 82,689 + Dsui_0084 0.80 -1.2 82,697 - Dsui_0084 0.81 -2.1 82,697 - Dsui_0084 0.81 -0.8 82,748 - Dsui_0084 0.84 +1.1 82,782 + Dsui_0084 0.85 -2.6 82,787 - Dsui_0084 0.86 +1.9 82,789 + Dsui_0084 0.86 -1.2 82,812 + Dsui_0084 0.87 -2.4 82,816 - Dsui_0084 0.87 -2.7 82,840 - Dsui_0084 0.89 -2.1 82,910 + -0.9 82,927 - -1.8 82,937 - -1.3 82,937 - +0.2 82,945 - -2.9 82,968 - -1.7 83,002 - -1.9 83,008 + -1.9 83,034 + -1.0 83,116 - +1.1 83,133 - +1.5 83,150 - +1.3 83,168 + -1.1 83,168 + -2.4 83,168 + +0.1 83,168 + -0.1 83,168 + -0.1 83,168 + +0.2 83,168 + -0.0 83,168 + +1.6 83,168 + +2.4 83,176 - +0.6 83,176 - +0.8 83,176 - +0.5 83,176 - +0.4 83,176 - +0.6 83,176 - +1.2 83,176 - +0.7 83,176 - +0.8 83,202 - +0.6 83,263 + +1.3 83,290 + +0.6 83,298 - +1.3 83,298 - +1.0 83,298 - +1.7 83,298 - +1.1 83,303 - +1.6 83,356 + -2.4 83,356 + -1.0 83,371 - -1.0 83,371 - +1.1 83,405 + -2.8 83,407 + -3.8 83,407 + -0.2 83,413 - +0.4 83,413 - -0.4 83,415 - +1.3 83,415 - -2.6 83,415 - -0.6 83,426 + -3.0 83,535 - Dsui_0085 0.17 -2.2 83,577 - Dsui_0085 0.21 -0.2 83,607 - Dsui_0085 0.24 -3.0 83,630 - Dsui_0085 0.26 -2.4 83,654 + Dsui_0085 0.28 -1.3 83,655 - Dsui_0085 0.28 -1.3 83,659 + Dsui_0085 0.29 -1.4 83,659 + Dsui_0085 0.29 -2.9 83,665 - Dsui_0085 0.29 -0.7 83,667 - Dsui_0085 0.30 -1.3 83,747 + Dsui_0085 0.37 -3.2 83,762 + Dsui_0085 0.38 +1.3 83,773 + Dsui_0085 0.39 -1.3 83,795 + Dsui_0085 0.41 -2.7 83,796 - Dsui_0085 0.41 -1.9 83,802 + Dsui_0085 0.42 -3.0 83,804 - Dsui_0085 0.42 -2.8 83,864 - Dsui_0085 0.48 -2.2 83,885 + Dsui_0085 0.50 -3.1 83,893 + Dsui_0085 0.50 -1.9 83,893 + Dsui_0085 0.50 -1.0 83,894 - Dsui_0085 0.50 -2.5 83,895 + Dsui_0085 0.50 -1.3 83,901 - Dsui_0085 0.51 -3.6 83,916 - Dsui_0085 0.52 -2.6 83,939 + Dsui_0085 0.54 -2.2 83,939 + Dsui_0085 0.54 -1.3 83,947 - Dsui_0085 0.55 -3.9 83,947 - Dsui_0085 0.55 -1.7 83,947 - Dsui_0085 0.55 -5.4 83,947 - Dsui_0085 0.55 -2.2 83,947 - Dsui_0085 0.55 -3.6 83,947 - Dsui_0085 0.55 -1.3 83,958 + +1.3 83,958 + Dsui_0085 0.56 -3.0 83,964 - Dsui_0085 0.57 -3.3 83,966 - Dsui_0085 0.57 -3.0 84,009 + Dsui_0085 0.61 -2.5 84,024 + Dsui_0085 0.62 -2.5 84,024 + Dsui_0085 0.62 -1.3 84,024 + -0.7 84,032 - Dsui_0085 0.63 -2.6 84,032 - Dsui_0085 0.63 -2.2 84,032 - Dsui_0085 0.63 -2.9 84,032 - Dsui_0085 0.63 -4.9 84,032 - Dsui_0085 0.63 -2.5
Or see this region's nucleotide sequence