Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27515

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27510 and BWI76_RS27515 are separated by 21 nucleotidesBWI76_RS27515 and BWI76_RS27520 are separated by 99 nucleotides BWI76_RS27510: BWI76_RS27510 - aquaporin, at 5,707,442 to 5,708,293 _RS27510 BWI76_RS27515: BWI76_RS27515 - glycerol kinase, at 5,708,315 to 5,709,826 _RS27515 BWI76_RS27520: BWI76_RS27520 - sodium/glutamate symporter, at 5,709,926 to 5,711,128 _RS27520 Position (kb) 5708 5709 5710Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 5707.534 kb on + strand, within BWI76_RS27510at 5707.625 kb on - strand, within BWI76_RS27510at 5707.647 kb on - strand, within BWI76_RS27510at 5707.656 kb on + strand, within BWI76_RS27510at 5707.711 kb on - strand, within BWI76_RS27510at 5707.793 kb on + strand, within BWI76_RS27510at 5708.038 kb on - strand, within BWI76_RS27510at 5708.177 kb on - strand, within BWI76_RS27510at 5708.208 kb on + strandat 5708.216 kb on - strandat 5708.226 kb on - strandat 5708.268 kb on - strandat 5708.275 kb on + strandat 5708.283 kb on - strandat 5708.283 kb on - strandat 5708.283 kb on - strandat 5708.288 kb on + strandat 5708.358 kb on - strandat 5708.454 kb on + strandat 5708.456 kb on - strandat 5708.465 kb on + strandat 5708.465 kb on + strandat 5708.478 kb on - strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.487 kb on + strand, within BWI76_RS27515at 5708.495 kb on - strand, within BWI76_RS27515at 5708.495 kb on - strand, within BWI76_RS27515at 5708.495 kb on - strandat 5708.495 kb on - strand, within BWI76_RS27515at 5708.495 kb on - strand, within BWI76_RS27515at 5708.495 kb on - strand, within BWI76_RS27515at 5708.495 kb on - strand, within BWI76_RS27515at 5708.504 kb on + strand, within BWI76_RS27515at 5708.517 kb on - strand, within BWI76_RS27515at 5708.667 kb on - strand, within BWI76_RS27515at 5708.673 kb on + strand, within BWI76_RS27515at 5708.808 kb on - strand, within BWI76_RS27515at 5708.861 kb on + strand, within BWI76_RS27515at 5708.874 kb on - strand, within BWI76_RS27515at 5708.984 kb on + strand, within BWI76_RS27515at 5708.995 kb on + strand, within BWI76_RS27515at 5709.071 kb on + strand, within BWI76_RS27515at 5709.084 kb on - strand, within BWI76_RS27515at 5709.131 kb on - strand, within BWI76_RS27515at 5709.173 kb on + strand, within BWI76_RS27515at 5709.532 kb on - strand, within BWI76_RS27515at 5709.612 kb on + strand, within BWI76_RS27515at 5709.648 kb on - strand, within BWI76_RS27515at 5709.684 kb on + strandat 5709.904 kb on - strandat 5709.956 kb on - strandat 5710.055 kb on - strand, within BWI76_RS27520at 5710.100 kb on + strand, within BWI76_RS27520at 5710.141 kb on - strand, within BWI76_RS27520at 5710.163 kb on - strand, within BWI76_RS27520at 5710.266 kb on + strand, within BWI76_RS27520at 5710.443 kb on - strand, within BWI76_RS27520

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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5,707,534 + BWI76_RS27510 0.11 -4.2
5,707,625 - BWI76_RS27510 0.21 -1.2
5,707,647 - BWI76_RS27510 0.24 -0.8
5,707,656 + BWI76_RS27510 0.25 -4.2
5,707,711 - BWI76_RS27510 0.32 -3.0
5,707,793 + BWI76_RS27510 0.41 -1.6
5,708,038 - BWI76_RS27510 0.70 -3.2
5,708,177 - BWI76_RS27510 0.86 -2.3
5,708,208 + -3.9
5,708,216 - -3.6
5,708,226 - -3.9
5,708,268 - -1.8
5,708,275 + -3.8
5,708,283 - -1.3
5,708,283 - -1.4
5,708,283 - -4.3
5,708,288 + -1.8
5,708,358 - -0.4
5,708,454 + -3.2
5,708,456 - -3.7
5,708,465 + -1.6
5,708,465 + -2.5
5,708,478 - BWI76_RS27515 0.11 -2.3
5,708,487 + BWI76_RS27515 0.11 -3.5
5,708,487 + BWI76_RS27515 0.11 +0.6
5,708,487 + BWI76_RS27515 0.11 -3.0
5,708,487 + BWI76_RS27515 0.11 -2.2
5,708,487 + BWI76_RS27515 0.11 -5.1
5,708,487 + BWI76_RS27515 0.11 -3.8
5,708,487 + BWI76_RS27515 0.11 -3.0
5,708,487 + BWI76_RS27515 0.11 -4.1
5,708,487 + BWI76_RS27515 0.11 -1.8
5,708,487 + BWI76_RS27515 0.11 -2.9
5,708,487 + BWI76_RS27515 0.11 -4.0
5,708,487 + BWI76_RS27515 0.11 -3.6
5,708,495 - BWI76_RS27515 0.12 -3.7
5,708,495 - BWI76_RS27515 0.12 -4.0
5,708,495 - +1.2
5,708,495 - BWI76_RS27515 0.12 -2.3
5,708,495 - BWI76_RS27515 0.12 -2.3
5,708,495 - BWI76_RS27515 0.12 -4.6
5,708,495 - BWI76_RS27515 0.12 -1.3
5,708,504 + BWI76_RS27515 0.12 -6.2
5,708,517 - BWI76_RS27515 0.13 -1.9
5,708,667 - BWI76_RS27515 0.23 -4.0
5,708,673 + BWI76_RS27515 0.24 -3.7
5,708,808 - BWI76_RS27515 0.33 -2.5
5,708,861 + BWI76_RS27515 0.36 -3.3
5,708,874 - BWI76_RS27515 0.37 -3.4
5,708,984 + BWI76_RS27515 0.44 -2.2
5,708,995 + BWI76_RS27515 0.45 -2.6
5,709,071 + BWI76_RS27515 0.50 -2.3
5,709,084 - BWI76_RS27515 0.51 -2.5
5,709,131 - BWI76_RS27515 0.54 -4.3
5,709,173 + BWI76_RS27515 0.57 -4.4
5,709,532 - BWI76_RS27515 0.80 -1.2
5,709,612 + BWI76_RS27515 0.86 -4.9
5,709,648 - BWI76_RS27515 0.88 -1.2
5,709,684 + -0.4
5,709,904 - -0.0
5,709,956 - -0.2
5,710,055 - BWI76_RS27520 0.11 +2.5
5,710,100 + BWI76_RS27520 0.14 +0.4
5,710,141 - BWI76_RS27520 0.18 -1.5
5,710,163 - BWI76_RS27520 0.20 +0.3
5,710,266 + BWI76_RS27520 0.28 +0.0
5,710,443 - BWI76_RS27520 0.43 -0.8

Or see this region's nucleotide sequence