Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22200 and BWI76_RS22205 overlap by 4 nucleotides BWI76_RS22205 and BWI76_RS22210 are separated by 236 nucleotides BWI76_RS22210 and BWI76_RS22215 are separated by 262 nucleotides BWI76_RS22215 and BWI76_RS22220 overlap by 4 nucleotides
BWI76_RS22200: BWI76_RS22200 - iron ABC transporter, at 4,629,011 to 4,629,874
_RS22200
BWI76_RS22205: BWI76_RS22205 - cation ABC transporter ATP-binding protein, at 4,629,871 to 4,630,548
_RS22205
BWI76_RS22210: BWI76_RS22210 - murein transglycosylase B, at 4,630,785 to 4,631,861
_RS22210
BWI76_RS22215: BWI76_RS22215 - PTS sorbitol transporter subunit IIC, at 4,632,124 to 4,632,687
_RS22215
BWI76_RS22220: BWI76_RS22220 - PTS glucitol/sorbitol transporter subunit IIB, at 4,632,684 to 4,633,661
_RS22220
Position (kb) 4630
4631
4632 Strain fitness (log2 ratio) -2
-1
0
1 at 4629.849 kb on + strand at 4629.927 kb on - strand at 4630.123 kb on - strand, within BWI76_RS22205 at 4630.233 kb on + strand, within BWI76_RS22205 at 4630.241 kb on - strand, within BWI76_RS22205 at 4630.497 kb on + strand at 4630.645 kb on + strand at 4631.308 kb on - strand, within BWI76_RS22210 at 4631.423 kb on + strand, within BWI76_RS22210 at 4631.433 kb on - strand, within BWI76_RS22210 at 4631.443 kb on + strand, within BWI76_RS22210 at 4631.453 kb on - strand, within BWI76_RS22210 at 4631.473 kb on - strand, within BWI76_RS22210 at 4631.795 kb on - strand at 4631.928 kb on - strand at 4632.049 kb on - strand at 4632.331 kb on + strand, within BWI76_RS22215 at 4632.390 kb on + strand, within BWI76_RS22215 at 4632.427 kb on - strand, within BWI76_RS22215 at 4632.560 kb on + strand, within BWI76_RS22215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 4,629,849 + -2.1 4,629,927 - -0.9 4,630,123 - BWI76_RS22205 0.37 +0.4 4,630,233 + BWI76_RS22205 0.53 -0.3 4,630,241 - BWI76_RS22205 0.55 -0.1 4,630,497 + -0.1 4,630,645 + +0.2 4,631,308 - BWI76_RS22210 0.49 -0.2 4,631,423 + BWI76_RS22210 0.59 +0.3 4,631,433 - BWI76_RS22210 0.60 +0.4 4,631,443 + BWI76_RS22210 0.61 -0.3 4,631,453 - BWI76_RS22210 0.62 +0.5 4,631,473 - BWI76_RS22210 0.64 +0.5 4,631,795 - +1.0 4,631,928 - -0.6 4,632,049 - -2.2 4,632,331 + BWI76_RS22215 0.37 -2.1 4,632,390 + BWI76_RS22215 0.47 -0.2 4,632,427 - BWI76_RS22215 0.54 -1.5 4,632,560 + BWI76_RS22215 0.77 -0.3
Or see this region's nucleotide sequence