Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18035

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18025 and BWI76_RS18030 are separated by 22 nucleotidesBWI76_RS18030 and BWI76_RS18035 are separated by 18 nucleotidesBWI76_RS18035 and BWI76_RS18040 are separated by 2 nucleotides BWI76_RS18025: BWI76_RS18025 - spore coat U domain-containing protein, at 3,746,154 to 3,746,705 _RS18025 BWI76_RS18030: BWI76_RS18030 - spore coat protein U, at 3,746,728 to 3,747,246 _RS18030 BWI76_RS18035: BWI76_RS18035 - fimbrial chaperone, at 3,747,265 to 3,748,029 _RS18035 BWI76_RS18040: BWI76_RS18040 - fimbrial assembly protein, at 3,748,032 to 3,750,362 _RS18040 Position (kb) 3747 3748 3749Strain fitness (log2 ratio) -2 -1 0 1at 3746.268 kb on + strand, within BWI76_RS18025at 3746.268 kb on + strand, within BWI76_RS18025at 3746.356 kb on - strand, within BWI76_RS18025at 3746.404 kb on + strand, within BWI76_RS18025at 3746.475 kb on + strand, within BWI76_RS18025at 3746.598 kb on + strand, within BWI76_RS18025at 3746.691 kb on + strandat 3746.916 kb on + strand, within BWI76_RS18030at 3746.928 kb on + strand, within BWI76_RS18030at 3746.938 kb on + strand, within BWI76_RS18030at 3746.994 kb on + strand, within BWI76_RS18030at 3747.017 kb on + strand, within BWI76_RS18030at 3747.048 kb on + strand, within BWI76_RS18030at 3747.161 kb on - strand, within BWI76_RS18030at 3747.163 kb on - strand, within BWI76_RS18030at 3747.240 kb on - strandat 3747.383 kb on + strand, within BWI76_RS18035at 3747.643 kb on + strand, within BWI76_RS18035at 3747.677 kb on + strand, within BWI76_RS18035at 3747.829 kb on + strand, within BWI76_RS18035at 3747.834 kb on + strand, within BWI76_RS18035at 3747.847 kb on - strand, within BWI76_RS18035at 3748.082 kb on + strandat 3748.318 kb on - strand, within BWI76_RS18040at 3748.633 kb on + strand, within BWI76_RS18040at 3748.682 kb on - strand, within BWI76_RS18040at 3748.689 kb on + strand, within BWI76_RS18040at 3748.702 kb on - strand, within BWI76_RS18040at 3748.858 kb on - strand, within BWI76_RS18040at 3748.872 kb on - strand, within BWI76_RS18040at 3748.874 kb on + strand, within BWI76_RS18040at 3748.877 kb on - strand, within BWI76_RS18040at 3748.978 kb on - strand, within BWI76_RS18040

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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3,746,268 + BWI76_RS18025 0.21 -0.5
3,746,268 + BWI76_RS18025 0.21 -0.1
3,746,356 - BWI76_RS18025 0.37 -1.8
3,746,404 + BWI76_RS18025 0.45 +0.4
3,746,475 + BWI76_RS18025 0.58 +0.3
3,746,598 + BWI76_RS18025 0.80 -0.0
3,746,691 + -1.5
3,746,916 + BWI76_RS18030 0.36 +0.0
3,746,928 + BWI76_RS18030 0.39 +0.2
3,746,938 + BWI76_RS18030 0.40 -0.2
3,746,994 + BWI76_RS18030 0.51 -0.1
3,747,017 + BWI76_RS18030 0.56 +1.3
3,747,048 + BWI76_RS18030 0.62 +0.3
3,747,161 - BWI76_RS18030 0.83 -1.5
3,747,163 - BWI76_RS18030 0.84 -0.6
3,747,240 - +0.9
3,747,383 + BWI76_RS18035 0.15 +0.8
3,747,643 + BWI76_RS18035 0.49 +0.4
3,747,677 + BWI76_RS18035 0.54 +0.9
3,747,829 + BWI76_RS18035 0.74 +0.4
3,747,834 + BWI76_RS18035 0.74 +0.3
3,747,847 - BWI76_RS18035 0.76 +0.1
3,748,082 + +0.3
3,748,318 - BWI76_RS18040 0.12 +0.7
3,748,633 + BWI76_RS18040 0.26 -0.1
3,748,682 - BWI76_RS18040 0.28 -0.3
3,748,689 + BWI76_RS18040 0.28 -0.3
3,748,702 - BWI76_RS18040 0.29 -0.7
3,748,858 - BWI76_RS18040 0.35 -0.2
3,748,872 - BWI76_RS18040 0.36 -0.3
3,748,874 + BWI76_RS18040 0.36 +0.1
3,748,877 - BWI76_RS18040 0.36 -0.2
3,748,978 - BWI76_RS18040 0.41 -1.5

Or see this region's nucleotide sequence