Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18025 and BWI76_RS18030 are separated by 22 nucleotides BWI76_RS18030 and BWI76_RS18035 are separated by 18 nucleotides BWI76_RS18035 and BWI76_RS18040 are separated by 2 nucleotides
BWI76_RS18025: BWI76_RS18025 - spore coat U domain-containing protein, at 3,746,154 to 3,746,705
_RS18025
BWI76_RS18030: BWI76_RS18030 - spore coat protein U, at 3,746,728 to 3,747,246
_RS18030
BWI76_RS18035: BWI76_RS18035 - fimbrial chaperone, at 3,747,265 to 3,748,029
_RS18035
BWI76_RS18040: BWI76_RS18040 - fimbrial assembly protein, at 3,748,032 to 3,750,362
_RS18040
Position (kb)
3747
3748
3749 Strain fitness (log2 ratio)
-2
-1
0
1 at 3746.268 kb on + strand, within BWI76_RS18025 at 3746.268 kb on + strand, within BWI76_RS18025 at 3746.356 kb on - strand, within BWI76_RS18025 at 3746.404 kb on + strand, within BWI76_RS18025 at 3746.475 kb on + strand, within BWI76_RS18025 at 3746.598 kb on + strand, within BWI76_RS18025 at 3746.691 kb on + strand at 3746.916 kb on + strand, within BWI76_RS18030 at 3746.928 kb on + strand, within BWI76_RS18030 at 3746.938 kb on + strand, within BWI76_RS18030 at 3746.994 kb on + strand, within BWI76_RS18030 at 3747.017 kb on + strand, within BWI76_RS18030 at 3747.048 kb on + strand, within BWI76_RS18030 at 3747.161 kb on - strand, within BWI76_RS18030 at 3747.163 kb on - strand, within BWI76_RS18030 at 3747.240 kb on - strand at 3747.383 kb on + strand, within BWI76_RS18035 at 3747.643 kb on + strand, within BWI76_RS18035 at 3747.677 kb on + strand, within BWI76_RS18035 at 3747.829 kb on + strand, within BWI76_RS18035 at 3747.834 kb on + strand, within BWI76_RS18035 at 3747.847 kb on - strand, within BWI76_RS18035 at 3748.082 kb on + strand at 3748.318 kb on - strand, within BWI76_RS18040 at 3748.633 kb on + strand, within BWI76_RS18040 at 3748.682 kb on - strand, within BWI76_RS18040 at 3748.689 kb on + strand, within BWI76_RS18040 at 3748.702 kb on - strand, within BWI76_RS18040 at 3748.858 kb on - strand, within BWI76_RS18040 at 3748.872 kb on - strand, within BWI76_RS18040 at 3748.874 kb on + strand, within BWI76_RS18040 at 3748.877 kb on - strand, within BWI76_RS18040 at 3748.978 kb on - strand, within BWI76_RS18040
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 3,746,268 + BWI76_RS18025 0.21 -0.5 3,746,268 + BWI76_RS18025 0.21 -0.1 3,746,356 - BWI76_RS18025 0.37 -1.8 3,746,404 + BWI76_RS18025 0.45 +0.4 3,746,475 + BWI76_RS18025 0.58 +0.3 3,746,598 + BWI76_RS18025 0.80 -0.0 3,746,691 + -1.5 3,746,916 + BWI76_RS18030 0.36 +0.0 3,746,928 + BWI76_RS18030 0.39 +0.2 3,746,938 + BWI76_RS18030 0.40 -0.2 3,746,994 + BWI76_RS18030 0.51 -0.1 3,747,017 + BWI76_RS18030 0.56 +1.3 3,747,048 + BWI76_RS18030 0.62 +0.3 3,747,161 - BWI76_RS18030 0.83 -1.5 3,747,163 - BWI76_RS18030 0.84 -0.6 3,747,240 - +0.9 3,747,383 + BWI76_RS18035 0.15 +0.8 3,747,643 + BWI76_RS18035 0.49 +0.4 3,747,677 + BWI76_RS18035 0.54 +0.9 3,747,829 + BWI76_RS18035 0.74 +0.4 3,747,834 + BWI76_RS18035 0.74 +0.3 3,747,847 - BWI76_RS18035 0.76 +0.1 3,748,082 + +0.3 3,748,318 - BWI76_RS18040 0.12 +0.7 3,748,633 + BWI76_RS18040 0.26 -0.1 3,748,682 - BWI76_RS18040 0.28 -0.3 3,748,689 + BWI76_RS18040 0.28 -0.3 3,748,702 - BWI76_RS18040 0.29 -0.7 3,748,858 - BWI76_RS18040 0.35 -0.2 3,748,872 - BWI76_RS18040 0.36 -0.3 3,748,874 + BWI76_RS18040 0.36 +0.1 3,748,877 - BWI76_RS18040 0.36 -0.2 3,748,978 - BWI76_RS18040 0.41 -1.5
Or see this region's nucleotide sequence