Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17515 and BWI76_RS17520 are separated by 12 nucleotides BWI76_RS17520 and BWI76_RS17525 are separated by 48 nucleotides BWI76_RS17525 and BWI76_RS17530 overlap by 96 nucleotides
BWI76_RS17515: BWI76_RS17515 - dihydropyrimidinase, at 3,632,423 to 3,633,829
_RS17515
BWI76_RS17520: BWI76_RS17520 - carbamate kinase, at 3,633,842 to 3,634,774
_RS17520
BWI76_RS17525: BWI76_RS17525 - XshC-Cox1-family protein, at 3,634,823 to 3,635,656
_RS17525
BWI76_RS17530: BWI76_RS17530 - hypothetical protein, at 3,635,561 to 3,635,938
_RS17530
Position (kb)
3633
3634
3635 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3632.876 kb on - strand, within BWI76_RS17515 at 3633.047 kb on - strand, within BWI76_RS17515 at 3633.173 kb on - strand at 3633.284 kb on + strand, within BWI76_RS17515 at 3633.354 kb on + strand, within BWI76_RS17515 at 3633.904 kb on + strand at 3633.904 kb on + strand at 3634.180 kb on - strand, within BWI76_RS17520 at 3634.396 kb on - strand, within BWI76_RS17520 at 3634.433 kb on + strand, within BWI76_RS17520 at 3634.472 kb on + strand, within BWI76_RS17520 at 3634.782 kb on - strand at 3635.433 kb on - strand, within BWI76_RS17525 at 3635.549 kb on + strand, within BWI76_RS17525 at 3635.563 kb on + strand at 3635.571 kb on - strand at 3635.582 kb on + strand at 3635.590 kb on - strand at 3635.603 kb on + strand at 3635.613 kb on - strand at 3635.615 kb on + strand at 3635.623 kb on - strand at 3635.623 kb on - strand at 3635.623 kb on - strand at 3635.623 kb on - strand at 3635.631 kb on - strand at 3635.670 kb on - strand, within BWI76_RS17530 at 3635.671 kb on - strand, within BWI76_RS17530 at 3635.685 kb on + strand, within BWI76_RS17530 at 3635.765 kb on + strand, within BWI76_RS17530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 3,632,876 - BWI76_RS17515 0.32 +0.4 3,633,047 - BWI76_RS17515 0.44 -2.0 3,633,173 - +0.8 3,633,284 + BWI76_RS17515 0.61 +0.3 3,633,354 + BWI76_RS17515 0.66 +0.5 3,633,904 + +0.8 3,633,904 + -0.7 3,634,180 - BWI76_RS17520 0.36 +0.1 3,634,396 - BWI76_RS17520 0.59 -0.8 3,634,433 + BWI76_RS17520 0.63 -0.4 3,634,472 + BWI76_RS17520 0.68 +0.2 3,634,782 - +0.2 3,635,433 - BWI76_RS17525 0.73 +1.2 3,635,549 + BWI76_RS17525 0.87 +0.9 3,635,563 + -0.3 3,635,571 - +0.0 3,635,582 + +0.7 3,635,590 - +1.0 3,635,603 + +1.9 3,635,613 - -0.8 3,635,615 + +0.2 3,635,623 - +1.2 3,635,623 - -0.2 3,635,623 - +1.2 3,635,623 - -0.6 3,635,631 - -0.5 3,635,670 - BWI76_RS17530 0.29 -2.0 3,635,671 - BWI76_RS17530 0.29 -1.8 3,635,685 + BWI76_RS17530 0.33 +2.4 3,635,765 + BWI76_RS17530 0.54 -0.5
Or see this region's nucleotide sequence