Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15965 and BWI76_RS15970 are separated by 419 nucleotides BWI76_RS15970 and BWI76_RS15975 are separated by 176 nucleotides BWI76_RS15975 and BWI76_RS15980 are separated by 149 nucleotides
BWI76_RS15965: BWI76_RS15965 - MFS transporter, at 3,311,408 to 3,312,658
_RS15965
BWI76_RS15970: BWI76_RS15970 - carboxypeptidase M32, at 3,313,078 to 3,314,565
_RS15970
BWI76_RS15975: BWI76_RS15975 - hypothetical protein, at 3,314,742 to 3,315,167
_RS15975
BWI76_RS15980: BWI76_RS15980 - lysine transporter LysE, at 3,315,317 to 3,315,579
_RS15980
BWI76_RS15985: BWI76_RS15985 - LysR family transcriptional regulator, at 3,315,560 to 3,315,784
_RS15985
Position (kb) 3313
3314
3315 Strain fitness (log2 ratio) -1
0
1
2 at 3312.323 kb on + strand at 3312.842 kb on - strand at 3313.022 kb on + strand at 3313.144 kb on - strand at 3313.493 kb on - strand, within BWI76_RS15970 at 3314.303 kb on - strand, within BWI76_RS15970 at 3314.645 kb on + strand at 3314.730 kb on + strand at 3314.782 kb on - strand at 3314.982 kb on + strand, within BWI76_RS15975 at 3315.261 kb on - strand at 3315.433 kb on - strand, within BWI76_RS15980
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 3,312,323 + -0.8 3,312,842 - -0.4 3,313,022 + +0.2 3,313,144 - +0.6 3,313,493 - BWI76_RS15970 0.28 -0.1 3,314,303 - BWI76_RS15970 0.82 +1.8 3,314,645 + -1.3 3,314,730 + -0.3 3,314,782 - -0.1 3,314,982 + BWI76_RS15975 0.56 +0.5 3,315,261 - +0.6 3,315,433 - BWI76_RS15980 0.44 +0.5
Or see this region's nucleotide sequence