Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09675 and BWI76_RS09680 are separated by 200 nucleotides BWI76_RS09680 and BWI76_RS09685 are separated by 10 nucleotides BWI76_RS09685 and BWI76_RS09690 are separated by 1 nucleotides
BWI76_RS09675: BWI76_RS09675 - serine--tRNA ligase, at 2,027,200 to 2,028,492
_RS09675
BWI76_RS09680: BWI76_RS09680 - dimethyl sulfoxide reductase subunit A, at 2,028,693 to 2,031,131
_RS09680
BWI76_RS09685: BWI76_RS09685 - dimethylsulfoxide reductase, chain B, at 2,031,142 to 2,031,759
_RS09685
BWI76_RS09690: BWI76_RS09690 - dimethyl sulfoxide reductase, at 2,031,761 to 2,032,624
_RS09690
Position (kb)
2028
2029
2030
2031
2032 Strain fitness (log2 ratio)
-1
0
1 at 2028.723 kb on - strand at 2028.793 kb on + strand at 2028.798 kb on + strand at 2028.844 kb on - strand at 2028.884 kb on + strand at 2028.975 kb on + strand, within BWI76_RS09680 at 2029.726 kb on - strand, within BWI76_RS09680 at 2029.749 kb on - strand, within BWI76_RS09680 at 2029.955 kb on + strand, within BWI76_RS09680 at 2030.539 kb on + strand, within BWI76_RS09680 at 2030.994 kb on - strand at 2030.998 kb on - strand at 2030.998 kb on - strand at 2031.012 kb on - strand at 2031.140 kb on - strand at 2031.752 kb on - strand at 2031.861 kb on - strand, within BWI76_RS09690
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 2,028,723 - +0.4 2,028,793 + -0.7 2,028,798 + -0.1 2,028,844 - +0.3 2,028,884 + -0.0 2,028,975 + BWI76_RS09680 0.12 +0.4 2,029,726 - BWI76_RS09680 0.42 +0.5 2,029,749 - BWI76_RS09680 0.43 +1.3 2,029,955 + BWI76_RS09680 0.52 -0.1 2,030,539 + BWI76_RS09680 0.76 +0.4 2,030,994 - +0.6 2,030,998 - +0.2 2,030,998 - -0.0 2,031,012 - -0.5 2,031,140 - -0.1 2,031,752 - -0.4 2,031,861 - BWI76_RS09690 0.12 -0.2
Or see this region's nucleotide sequence