Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09615 and BWI76_RS09620 are separated by 138 nucleotides BWI76_RS09620 and BWI76_RS09625 overlap by 73 nucleotides BWI76_RS09625 and BWI76_RS09630 are separated by 0 nucleotides BWI76_RS09630 and BWI76_RS09635 are separated by 38 nucleotides
BWI76_RS09615: BWI76_RS09615 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 2,011,511 to 2,013,793
_RS09615
BWI76_RS09620: BWI76_RS09620 - translation initiation factor IF-1, at 2,013,932 to 2,014,150
_RS09620
BWI76_RS09625: BWI76_RS09625 - hypothetical protein, at 2,014,078 to 2,014,429
_RS09625
BWI76_RS09630: BWI76_RS09630 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,014,430 to 2,015,134
_RS09630
BWI76_RS09635: BWI76_RS09635 - amino acid ABC transporter ATP-binding protein, at 2,015,173 to 2,016,894
_RS09635
Position (kb)
2014
2015 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2013.343 kb on + strand, within BWI76_RS09615 at 2013.483 kb on - strand, within BWI76_RS09615 at 2014.300 kb on + strand, within BWI76_RS09625 at 2014.875 kb on - strand, within BWI76_RS09630 at 2014.886 kb on - strand, within BWI76_RS09630 at 2015.107 kb on + strand at 2015.184 kb on + strand at 2015.192 kb on - strand at 2015.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 2,013,343 + BWI76_RS09615 0.80 -0.7 2,013,483 - BWI76_RS09615 0.86 -2.2 2,014,300 + BWI76_RS09625 0.63 -2.0 2,014,875 - BWI76_RS09630 0.63 +0.2 2,014,886 - BWI76_RS09630 0.65 -0.1 2,015,107 + -0.2 2,015,184 + -0.2 2,015,192 - -0.3 2,015,306 - -3.4
Or see this region's nucleotide sequence