Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09060 and BWI76_RS09065 are separated by 136 nucleotides BWI76_RS09065 and BWI76_RS09070 are separated by 209 nucleotides
BWI76_RS09060: BWI76_RS09060 - hypothetical protein, at 1,911,179 to 1,912,444
_RS09060
BWI76_RS09065: BWI76_RS09065 - sugar phosphatase SupH, at 1,912,581 to 1,913,396
_RS09065
BWI76_RS09070: BWI76_RS09070 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 1,913,606 to 1,916,038
_RS09070
Position (kb)
1912
1913
1914 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1911.667 kb on - strand, within BWI76_RS09060 at 1911.710 kb on - strand, within BWI76_RS09060 at 1912.334 kb on + strand at 1912.435 kb on - strand at 1912.570 kb on - strand at 1912.791 kb on - strand, within BWI76_RS09065 at 1912.817 kb on - strand, within BWI76_RS09065 at 1912.827 kb on - strand, within BWI76_RS09065 at 1913.000 kb on + strand, within BWI76_RS09065 at 1913.593 kb on - strand at 1913.657 kb on - strand at 1913.713 kb on + strand at 1914.238 kb on - strand, within BWI76_RS09070 at 1914.290 kb on - strand, within BWI76_RS09070 at 1914.308 kb on - strand, within BWI76_RS09070 at 1914.388 kb on + strand, within BWI76_RS09070 at 1914.388 kb on + strand, within BWI76_RS09070 at 1914.396 kb on - strand, within BWI76_RS09070 at 1914.396 kb on - strand, within BWI76_RS09070
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 1,911,667 - BWI76_RS09060 0.39 +0.1 1,911,710 - BWI76_RS09060 0.42 -0.2 1,912,334 + +0.4 1,912,435 - -0.2 1,912,570 - -0.2 1,912,791 - BWI76_RS09065 0.26 -1.8 1,912,817 - BWI76_RS09065 0.29 -1.1 1,912,827 - BWI76_RS09065 0.30 -1.1 1,913,000 + BWI76_RS09065 0.51 -2.8 1,913,593 - -0.6 1,913,657 - -0.0 1,913,713 + +0.4 1,914,238 - BWI76_RS09070 0.26 +0.5 1,914,290 - BWI76_RS09070 0.28 +0.2 1,914,308 - BWI76_RS09070 0.29 -0.2 1,914,388 + BWI76_RS09070 0.32 +0.3 1,914,388 + BWI76_RS09070 0.32 -0.1 1,914,396 - BWI76_RS09070 0.32 +0.1 1,914,396 - BWI76_RS09070 0.32 -1.1
Or see this region's nucleotide sequence