Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07050 and BWI76_RS07055 are separated by 10 nucleotides BWI76_RS07055 and BWI76_RS07060 are separated by 9 nucleotides BWI76_RS07060 and BWI76_RS07065 are separated by 220 nucleotides
BWI76_RS07050: BWI76_RS07050 - putative cytoplasmic protein, at 1,483,353 to 1,484,612
_RS07050
BWI76_RS07055: BWI76_RS07055 - putative cytoplasmic protein, at 1,484,623 to 1,485,426
_RS07055
BWI76_RS07060: BWI76_RS07060 - carbamate kinase, at 1,485,436 to 1,486,329
_RS07060
BWI76_RS07065: BWI76_RS07065 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 1,486,550 to 1,487,617
_RS07065
Position (kb)
1485
1486
1487 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 1484.473 kb on + strand, within BWI76_RS07050 at 1484.606 kb on + strand at 1484.693 kb on + strand at 1484.753 kb on + strand, within BWI76_RS07055 at 1484.761 kb on - strand, within BWI76_RS07055 at 1484.877 kb on + strand, within BWI76_RS07055 at 1485.024 kb on - strand, within BWI76_RS07055 at 1485.050 kb on + strand, within BWI76_RS07055 at 1485.056 kb on + strand, within BWI76_RS07055 at 1485.238 kb on + strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.485 kb on + strand at 1485.605 kb on - strand, within BWI76_RS07060 at 1485.928 kb on - strand, within BWI76_RS07060 at 1486.079 kb on - strand, within BWI76_RS07060 at 1486.271 kb on - strand at 1486.360 kb on + strand at 1486.362 kb on + strand at 1486.540 kb on - strand at 1486.753 kb on - strand, within BWI76_RS07065 at 1486.967 kb on - strand, within BWI76_RS07065 at 1487.019 kb on + strand, within BWI76_RS07065 at 1487.154 kb on - strand, within BWI76_RS07065 at 1487.222 kb on + strand, within BWI76_RS07065 at 1487.293 kb on - strand, within BWI76_RS07065 at 1487.293 kb on - strand, within BWI76_RS07065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 1,484,473 + BWI76_RS07050 0.89 +0.8 1,484,606 + +0.5 1,484,693 + -0.2 1,484,753 + BWI76_RS07055 0.16 +0.5 1,484,761 - BWI76_RS07055 0.17 -0.4 1,484,877 + BWI76_RS07055 0.32 +1.8 1,485,024 - BWI76_RS07055 0.50 +0.3 1,485,050 + BWI76_RS07055 0.53 -1.7 1,485,056 + BWI76_RS07055 0.54 +0.3 1,485,238 + BWI76_RS07055 0.76 -0.4 1,485,246 - BWI76_RS07055 0.77 +0.9 1,485,246 - BWI76_RS07055 0.77 -0.3 1,485,485 + +0.2 1,485,605 - BWI76_RS07060 0.19 +0.0 1,485,928 - BWI76_RS07060 0.55 -0.0 1,486,079 - BWI76_RS07060 0.72 +0.4 1,486,271 - -0.9 1,486,360 + +0.2 1,486,362 + -0.5 1,486,540 - +0.1 1,486,753 - BWI76_RS07065 0.19 -6.2 1,486,967 - BWI76_RS07065 0.39 -3.1 1,487,019 + BWI76_RS07065 0.44 -0.5 1,487,154 - BWI76_RS07065 0.57 -2.8 1,487,222 + BWI76_RS07065 0.63 -4.2 1,487,293 - BWI76_RS07065 0.70 -5.5 1,487,293 - BWI76_RS07065 0.70 -4.7
Or see this region's nucleotide sequence