Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07060

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07050 and BWI76_RS07055 are separated by 10 nucleotidesBWI76_RS07055 and BWI76_RS07060 are separated by 9 nucleotidesBWI76_RS07060 and BWI76_RS07065 are separated by 220 nucleotides BWI76_RS07050: BWI76_RS07050 - putative cytoplasmic protein, at 1,483,353 to 1,484,612 _RS07050 BWI76_RS07055: BWI76_RS07055 - putative cytoplasmic protein, at 1,484,623 to 1,485,426 _RS07055 BWI76_RS07060: BWI76_RS07060 - carbamate kinase, at 1,485,436 to 1,486,329 _RS07060 BWI76_RS07065: BWI76_RS07065 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 1,486,550 to 1,487,617 _RS07065 Position (kb) 1485 1486 1487Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 1484.473 kb on + strand, within BWI76_RS07050at 1484.606 kb on + strandat 1484.693 kb on + strandat 1484.753 kb on + strand, within BWI76_RS07055at 1484.761 kb on - strand, within BWI76_RS07055at 1484.877 kb on + strand, within BWI76_RS07055at 1485.024 kb on - strand, within BWI76_RS07055at 1485.050 kb on + strand, within BWI76_RS07055at 1485.056 kb on + strand, within BWI76_RS07055at 1485.238 kb on + strand, within BWI76_RS07055at 1485.246 kb on - strand, within BWI76_RS07055at 1485.246 kb on - strand, within BWI76_RS07055at 1485.485 kb on + strandat 1485.605 kb on - strand, within BWI76_RS07060at 1485.928 kb on - strand, within BWI76_RS07060at 1486.079 kb on - strand, within BWI76_RS07060at 1486.271 kb on - strandat 1486.360 kb on + strandat 1486.362 kb on + strandat 1486.540 kb on - strandat 1486.753 kb on - strand, within BWI76_RS07065at 1486.967 kb on - strand, within BWI76_RS07065at 1487.019 kb on + strand, within BWI76_RS07065at 1487.154 kb on - strand, within BWI76_RS07065at 1487.222 kb on + strand, within BWI76_RS07065at 1487.293 kb on - strand, within BWI76_RS07065at 1487.293 kb on - strand, within BWI76_RS07065

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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1,484,473 + BWI76_RS07050 0.89 +0.8
1,484,606 + +0.5
1,484,693 + -0.2
1,484,753 + BWI76_RS07055 0.16 +0.5
1,484,761 - BWI76_RS07055 0.17 -0.4
1,484,877 + BWI76_RS07055 0.32 +1.8
1,485,024 - BWI76_RS07055 0.50 +0.3
1,485,050 + BWI76_RS07055 0.53 -1.7
1,485,056 + BWI76_RS07055 0.54 +0.3
1,485,238 + BWI76_RS07055 0.76 -0.4
1,485,246 - BWI76_RS07055 0.77 +0.9
1,485,246 - BWI76_RS07055 0.77 -0.3
1,485,485 + +0.2
1,485,605 - BWI76_RS07060 0.19 +0.0
1,485,928 - BWI76_RS07060 0.55 -0.0
1,486,079 - BWI76_RS07060 0.72 +0.4
1,486,271 - -0.9
1,486,360 + +0.2
1,486,362 + -0.5
1,486,540 - +0.1
1,486,753 - BWI76_RS07065 0.19 -6.2
1,486,967 - BWI76_RS07065 0.39 -3.1
1,487,019 + BWI76_RS07065 0.44 -0.5
1,487,154 - BWI76_RS07065 0.57 -2.8
1,487,222 + BWI76_RS07065 0.63 -4.2
1,487,293 - BWI76_RS07065 0.70 -5.5
1,487,293 - BWI76_RS07065 0.70 -4.7

Or see this region's nucleotide sequence