Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05500 and BWI76_RS05505 overlap by 8 nucleotides BWI76_RS05505 and BWI76_RS05510 are separated by 6 nucleotides BWI76_RS05510 and BWI76_RS05515 are separated by 11 nucleotides
BWI76_RS05500: BWI76_RS05500 - NADH:ubiquinone reductase (Na(+)-transporting) subunit C, at 1,154,412 to 1,155,206
_RS05500
BWI76_RS05505: BWI76_RS05505 - NADH:ubiquinone reductase (Na(+)-transporting) subunit D, at 1,155,199 to 1,155,837
_RS05505
BWI76_RS05510: BWI76_RS05510 - NADH:ubiquinone reductase (Na(+)-transporting) subunit E, at 1,155,844 to 1,156,440
_RS05510
BWI76_RS05515: BWI76_RS05515 - NADH:ubiquinone reductase (Na(+)-transporting) subunit F, at 1,156,452 to 1,157,675
_RS05515
Position (kb)
1155
1156
1157 Strain fitness (log2 ratio)
-1
0
1 at 1154.954 kb on + strand, within BWI76_RS05500 at 1155.068 kb on + strand, within BWI76_RS05500 at 1155.074 kb on - strand, within BWI76_RS05500 at 1155.089 kb on + strand, within BWI76_RS05500 at 1155.862 kb on - strand at 1156.033 kb on - strand, within BWI76_RS05510 at 1156.158 kb on + strand, within BWI76_RS05510 at 1156.158 kb on + strand, within BWI76_RS05510 at 1156.166 kb on - strand, within BWI76_RS05510 at 1156.375 kb on - strand, within BWI76_RS05510 at 1156.375 kb on - strand, within BWI76_RS05510 at 1156.511 kb on + strand at 1156.733 kb on + strand, within BWI76_RS05515 at 1156.858 kb on - strand, within BWI76_RS05515 at 1157.126 kb on - strand, within BWI76_RS05515 at 1157.340 kb on + strand, within BWI76_RS05515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 1,154,954 + BWI76_RS05500 0.68 +0.2 1,155,068 + BWI76_RS05500 0.83 -0.5 1,155,074 - BWI76_RS05500 0.83 +0.1 1,155,089 + BWI76_RS05500 0.85 -0.9 1,155,862 - -1.5 1,156,033 - BWI76_RS05510 0.32 +0.1 1,156,158 + BWI76_RS05510 0.53 +0.8 1,156,158 + BWI76_RS05510 0.53 +1.0 1,156,166 - BWI76_RS05510 0.54 +0.6 1,156,375 - BWI76_RS05510 0.89 -0.9 1,156,375 - BWI76_RS05510 0.89 +1.6 1,156,511 + -0.2 1,156,733 + BWI76_RS05515 0.23 -1.4 1,156,858 - BWI76_RS05515 0.33 -0.6 1,157,126 - BWI76_RS05515 0.55 +0.2 1,157,340 + BWI76_RS05515 0.73 -0.9
Or see this region's nucleotide sequence