Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03305 and BWI76_RS03310 are separated by 24 nucleotides BWI76_RS03310 and BWI76_RS03315 are separated by 186 nucleotides BWI76_RS03315 and BWI76_RS03320 are separated by 56 nucleotides
BWI76_RS03305: BWI76_RS03305 - hypothetical protein, at 681,094 to 682,334
_RS03305
BWI76_RS03310: BWI76_RS03310 - AraC family transcriptional regulator, at 682,359 to 682,946
_RS03310
BWI76_RS03315: BWI76_RS03315 - clavaldehyde dehydrogenase, at 683,133 to 683,900
_RS03315
BWI76_RS03320: BWI76_RS03320 - alcohol dehydrogenase, at 683,957 to 685,015
_RS03320
Position (kb) 683
684 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 682.401 kb on - strand at 682.457 kb on + strand, within BWI76_RS03310 at 682.462 kb on + strand, within BWI76_RS03310 at 682.660 kb on + strand, within BWI76_RS03310 at 682.744 kb on - strand, within BWI76_RS03310 at 682.776 kb on + strand, within BWI76_RS03310 at 682.943 kb on + strand at 683.035 kb on + strand at 683.180 kb on - strand at 683.424 kb on - strand, within BWI76_RS03315 at 683.497 kb on + strand at 683.548 kb on + strand, within BWI76_RS03315 at 683.554 kb on + strand, within BWI76_RS03315 at 683.562 kb on - strand, within BWI76_RS03315 at 683.562 kb on - strand, within BWI76_RS03315 at 683.844 kb on + strand at 683.934 kb on + strand at 683.947 kb on + strand at 683.953 kb on - strand at 683.965 kb on - strand at 683.981 kb on - strand at 684.000 kb on - strand at 684.000 kb on - strand at 684.086 kb on - strand, within BWI76_RS03320 at 684.104 kb on + strand, within BWI76_RS03320 at 684.114 kb on + strand, within BWI76_RS03320 at 684.130 kb on + strand, within BWI76_RS03320 at 684.159 kb on + strand, within BWI76_RS03320 at 684.196 kb on + strand, within BWI76_RS03320 at 684.196 kb on + strand, within BWI76_RS03320 at 684.396 kb on + strand at 684.431 kb on + strand, within BWI76_RS03320 at 684.461 kb on + strand, within BWI76_RS03320 at 684.492 kb on + strand, within BWI76_RS03320 at 684.510 kb on + strand, within BWI76_RS03320 at 684.519 kb on - strand, within BWI76_RS03320 at 684.546 kb on + strand, within BWI76_RS03320 at 684.566 kb on - strand, within BWI76_RS03320 at 684.589 kb on + strand, within BWI76_RS03320 at 684.597 kb on + strand, within BWI76_RS03320 at 684.606 kb on - strand, within BWI76_RS03320 at 684.609 kb on + strand, within BWI76_RS03320 at 684.708 kb on + strand, within BWI76_RS03320 at 684.712 kb on + strand, within BWI76_RS03320 at 684.752 kb on + strand, within BWI76_RS03320 at 684.827 kb on + strand, within BWI76_RS03320 at 684.833 kb on - strand, within BWI76_RS03320
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 682,401 - -0.5 682,457 + BWI76_RS03310 0.17 +0.2 682,462 + BWI76_RS03310 0.18 +0.5 682,660 + BWI76_RS03310 0.51 -0.3 682,744 - BWI76_RS03310 0.65 -0.1 682,776 + BWI76_RS03310 0.71 -0.5 682,943 + -0.7 683,035 + +1.2 683,180 - -0.3 683,424 - BWI76_RS03315 0.38 +0.5 683,497 + +0.6 683,548 + BWI76_RS03315 0.54 +0.3 683,554 + BWI76_RS03315 0.55 +1.5 683,562 - BWI76_RS03315 0.56 -0.0 683,562 - BWI76_RS03315 0.56 +0.3 683,844 + +0.1 683,934 + -2.0 683,947 + -1.0 683,953 - -0.6 683,965 - -0.8 683,981 - -0.4 684,000 - +0.4 684,000 - +0.0 684,086 - BWI76_RS03320 0.12 +2.8 684,104 + BWI76_RS03320 0.14 -0.6 684,114 + BWI76_RS03320 0.15 -0.2 684,130 + BWI76_RS03320 0.16 +0.5 684,159 + BWI76_RS03320 0.19 +0.7 684,196 + BWI76_RS03320 0.23 +0.1 684,196 + BWI76_RS03320 0.23 +0.4 684,396 + -0.4 684,431 + BWI76_RS03320 0.45 -0.3 684,461 + BWI76_RS03320 0.48 -0.3 684,492 + BWI76_RS03320 0.51 +0.4 684,510 + BWI76_RS03320 0.52 +0.3 684,519 - BWI76_RS03320 0.53 -0.2 684,546 + BWI76_RS03320 0.56 +0.1 684,566 - BWI76_RS03320 0.58 +0.5 684,589 + BWI76_RS03320 0.60 -0.0 684,597 + BWI76_RS03320 0.60 -0.2 684,606 - BWI76_RS03320 0.61 +0.2 684,609 + BWI76_RS03320 0.62 -0.8 684,708 + BWI76_RS03320 0.71 -2.7 684,712 + BWI76_RS03320 0.71 -0.2 684,752 + BWI76_RS03320 0.75 +0.2 684,827 + BWI76_RS03320 0.82 -0.2 684,833 - BWI76_RS03320 0.83 -2.1
Or see this region's nucleotide sequence