Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02540 and BWI76_RS02545 are separated by 65 nucleotides BWI76_RS02545 and BWI76_RS02550 are separated by 2 nucleotides
BWI76_RS02540: BWI76_RS02540 - GTPase HflX, at 520,341 to 521,621
_RS02540
BWI76_RS02545: BWI76_RS02545 - protease modulator HflK, at 521,687 to 522,943
_RS02545
BWI76_RS02550: BWI76_RS02550 - protease modulator HflC, at 522,946 to 523,950
_RS02550
Position (kb) 521
522
523 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 520.794 kb on - strand, within BWI76_RS02540 at 520.799 kb on - strand, within BWI76_RS02540 at 520.825 kb on - strand, within BWI76_RS02540 at 520.849 kb on + strand, within BWI76_RS02540 at 521.003 kb on + strand, within BWI76_RS02540 at 521.011 kb on - strand, within BWI76_RS02540 at 521.252 kb on + strand, within BWI76_RS02540 at 521.311 kb on + strand, within BWI76_RS02540 at 521.357 kb on + strand, within BWI76_RS02540 at 521.441 kb on + strand, within BWI76_RS02540 at 521.516 kb on - strand at 521.541 kb on + strand at 521.550 kb on - strand at 521.684 kb on + strand at 522.172 kb on - strand, within BWI76_RS02545 at 522.186 kb on - strand, within BWI76_RS02545 at 522.375 kb on + strand, within BWI76_RS02545 at 522.375 kb on + strand, within BWI76_RS02545 at 522.375 kb on + strand, within BWI76_RS02545 at 522.383 kb on - strand, within BWI76_RS02545 at 522.576 kb on - strand, within BWI76_RS02545 at 522.592 kb on + strand, within BWI76_RS02545 at 522.628 kb on + strand, within BWI76_RS02545 at 522.628 kb on + strand, within BWI76_RS02545 at 522.712 kb on + strand, within BWI76_RS02545 at 522.898 kb on - strand at 523.054 kb on + strand, within BWI76_RS02550 at 523.078 kb on + strand, within BWI76_RS02550 at 523.078 kb on + strand, within BWI76_RS02550 at 523.359 kb on - strand, within BWI76_RS02550 at 523.388 kb on + strand, within BWI76_RS02550 at 523.677 kb on - strand, within BWI76_RS02550 at 523.828 kb on + strand, within BWI76_RS02550 at 523.874 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 520,794 - BWI76_RS02540 0.35 -2.8 520,799 - BWI76_RS02540 0.36 -2.0 520,825 - BWI76_RS02540 0.38 -1.5 520,849 + BWI76_RS02540 0.40 -0.3 521,003 + BWI76_RS02540 0.52 -0.3 521,011 - BWI76_RS02540 0.52 +0.4 521,252 + BWI76_RS02540 0.71 +0.2 521,311 + BWI76_RS02540 0.76 -0.8 521,357 + BWI76_RS02540 0.79 -0.3 521,441 + BWI76_RS02540 0.86 -0.4 521,516 - -1.5 521,541 + +0.4 521,550 - -2.4 521,684 + -1.2 522,172 - BWI76_RS02545 0.39 -1.5 522,186 - BWI76_RS02545 0.40 -0.3 522,375 + BWI76_RS02545 0.55 -3.9 522,375 + BWI76_RS02545 0.55 -3.3 522,375 + BWI76_RS02545 0.55 -0.9 522,383 - BWI76_RS02545 0.55 -1.4 522,576 - BWI76_RS02545 0.71 -1.5 522,592 + BWI76_RS02545 0.72 -3.4 522,628 + BWI76_RS02545 0.75 -0.5 522,628 + BWI76_RS02545 0.75 -1.3 522,712 + BWI76_RS02545 0.82 -1.2 522,898 - -1.3 523,054 + BWI76_RS02550 0.11 -0.1 523,078 + BWI76_RS02550 0.13 -1.8 523,078 + BWI76_RS02550 0.13 +1.2 523,359 - BWI76_RS02550 0.41 -1.8 523,388 + BWI76_RS02550 0.44 -1.3 523,677 - BWI76_RS02550 0.73 +0.0 523,828 + BWI76_RS02550 0.88 -1.0 523,874 + -1.4
Or see this region's nucleotide sequence