Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01740 and BWI76_RS01745 are separated by 9 nucleotides BWI76_RS01745 and BWI76_RS01750 are separated by 70 nucleotides BWI76_RS01750 and BWI76_RS01755 are separated by 348 nucleotides
BWI76_RS01740: BWI76_RS01740 - PTS enzyme IIAB, mannose-specific, at 356,176 to 356,583
_RS01740
BWI76_RS01745: BWI76_RS01745 - Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) <small>(from data)</small>, at 356,593 to 357,396
_RS01745
BWI76_RS01750: BWI76_RS01750 - Cro/Cl family transcriptional regulator, at 357,467 to 358,414
_RS01750
BWI76_RS01755: BWI76_RS01755 - 23S rRNA pseudouridine synthase F, at 358,763 to 359,635
_RS01755
Position (kb) 357
358
359 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2 at 356.500 kb on - strand, within BWI76_RS01740 at 356.509 kb on + strand, within BWI76_RS01740 at 356.514 kb on + strand, within BWI76_RS01740 at 356.517 kb on - strand, within BWI76_RS01740 at 356.536 kb on - strand, within BWI76_RS01740 at 356.545 kb on + strand at 356.545 kb on + strand at 356.575 kb on - strand at 356.767 kb on + strand, within BWI76_RS01745 at 356.791 kb on - strand, within BWI76_RS01745 at 356.798 kb on - strand, within BWI76_RS01745 at 356.857 kb on - strand, within BWI76_RS01745 at 356.883 kb on + strand, within BWI76_RS01745 at 356.883 kb on + strand, within BWI76_RS01745 at 356.883 kb on + strand, within BWI76_RS01745 at 356.891 kb on - strand, within BWI76_RS01745 at 356.901 kb on - strand, within BWI76_RS01745 at 356.913 kb on + strand, within BWI76_RS01745 at 356.923 kb on + strand, within BWI76_RS01745 at 356.931 kb on - strand, within BWI76_RS01745 at 356.948 kb on - strand, within BWI76_RS01745 at 356.973 kb on + strand, within BWI76_RS01745 at 356.986 kb on + strand, within BWI76_RS01745 at 356.986 kb on + strand, within BWI76_RS01745 at 356.986 kb on + strand, within BWI76_RS01745 at 356.986 kb on - strand, within BWI76_RS01745 at 356.988 kb on + strand, within BWI76_RS01745 at 356.988 kb on + strand, within BWI76_RS01745 at 356.988 kb on + strand, within BWI76_RS01745 at 356.988 kb on + strand, within BWI76_RS01745 at 356.994 kb on - strand, within BWI76_RS01745 at 356.996 kb on - strand at 356.996 kb on - strand, within BWI76_RS01745 at 356.996 kb on - strand, within BWI76_RS01745 at 356.996 kb on - strand, within BWI76_RS01745 at 356.996 kb on - strand, within BWI76_RS01745 at 356.996 kb on - strand, within BWI76_RS01745 at 357.019 kb on - strand, within BWI76_RS01745 at 357.032 kb on + strand, within BWI76_RS01745 at 357.072 kb on + strand, within BWI76_RS01745 at 357.073 kb on + strand, within BWI76_RS01745 at 357.080 kb on - strand, within BWI76_RS01745 at 357.104 kb on - strand, within BWI76_RS01745 at 357.104 kb on - strand, within BWI76_RS01745 at 357.127 kb on + strand, within BWI76_RS01745 at 357.127 kb on - strand, within BWI76_RS01745 at 357.132 kb on + strand, within BWI76_RS01745 at 357.135 kb on - strand, within BWI76_RS01745 at 357.137 kb on + strand, within BWI76_RS01745 at 357.139 kb on - strand, within BWI76_RS01745 at 357.140 kb on - strand, within BWI76_RS01745 at 357.145 kb on - strand, within BWI76_RS01745 at 357.148 kb on - strand, within BWI76_RS01745 at 357.153 kb on - strand at 357.160 kb on - strand, within BWI76_RS01745 at 357.169 kb on - strand, within BWI76_RS01745 at 357.171 kb on - strand at 357.182 kb on - strand, within BWI76_RS01745 at 357.199 kb on - strand, within BWI76_RS01745 at 357.208 kb on + strand, within BWI76_RS01745 at 357.209 kb on - strand at 357.222 kb on - strand, within BWI76_RS01745 at 357.235 kb on - strand, within BWI76_RS01745 at 357.245 kb on + strand, within BWI76_RS01745 at 357.245 kb on + strand, within BWI76_RS01745 at 357.258 kb on - strand, within BWI76_RS01745 at 357.292 kb on - strand, within BWI76_RS01745 at 357.313 kb on + strand, within BWI76_RS01745 at 357.313 kb on - strand, within BWI76_RS01745 at 357.321 kb on - strand at 357.416 kb on + strand at 357.424 kb on - strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.434 kb on + strand at 357.437 kb on - strand at 357.439 kb on - strand at 357.442 kb on - strand at 357.442 kb on - strand at 357.442 kb on - strand at 357.442 kb on - strand at 357.442 kb on - strand at 357.442 kb on - strand at 357.474 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.481 kb on + strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.489 kb on - strand at 357.513 kb on - strand at 357.513 kb on - strand at 357.518 kb on - strand at 357.525 kb on + strand at 357.527 kb on + strand at 357.527 kb on + strand at 357.527 kb on + strand at 357.533 kb on - strand at 357.533 kb on - strand at 357.533 kb on - strand at 357.534 kb on + strand at 357.534 kb on + strand at 357.535 kb on - strand at 357.535 kb on - strand at 357.535 kb on - strand at 357.542 kb on - strand at 357.551 kb on + strand at 357.551 kb on + strand at 357.576 kb on - strand, within BWI76_RS01750 at 357.577 kb on + strand, within BWI76_RS01750 at 357.577 kb on + strand, within BWI76_RS01750 at 357.577 kb on + strand, within BWI76_RS01750 at 357.577 kb on + strand, within BWI76_RS01750 at 357.577 kb on + strand, within BWI76_RS01750 at 357.579 kb on + strand, within BWI76_RS01750 at 357.585 kb on - strand, within BWI76_RS01750 at 357.585 kb on - strand, within BWI76_RS01750 at 357.587 kb on - strand, within BWI76_RS01750 at 357.594 kb on + strand, within BWI76_RS01750 at 357.599 kb on + strand, within BWI76_RS01750 at 357.602 kb on - strand, within BWI76_RS01750 at 357.602 kb on - strand, within BWI76_RS01750 at 357.608 kb on - strand, within BWI76_RS01750 at 357.610 kb on + strand, within BWI76_RS01750 at 357.618 kb on - strand, within BWI76_RS01750 at 357.618 kb on - strand, within BWI76_RS01750 at 357.618 kb on - strand, within BWI76_RS01750 at 357.618 kb on - strand, within BWI76_RS01750 at 357.644 kb on + strand, within BWI76_RS01750 at 357.645 kb on - strand, within BWI76_RS01750 at 357.648 kb on + strand, within BWI76_RS01750 at 357.656 kb on - strand, within BWI76_RS01750 at 357.656 kb on - strand, within BWI76_RS01750 at 357.656 kb on - strand, within BWI76_RS01750 at 357.663 kb on + strand, within BWI76_RS01750 at 357.704 kb on + strand, within BWI76_RS01750 at 357.705 kb on - strand, within BWI76_RS01750 at 357.707 kb on + strand, within BWI76_RS01750 at 357.712 kb on - strand, within BWI76_RS01750 at 357.719 kb on + strand, within BWI76_RS01750 at 357.724 kb on + strand, within BWI76_RS01750 at 357.724 kb on + strand, within BWI76_RS01750 at 357.724 kb on + strand, within BWI76_RS01750 at 357.730 kb on - strand, within BWI76_RS01750 at 357.732 kb on - strand, within BWI76_RS01750 at 357.739 kb on - strand, within BWI76_RS01750 at 357.788 kb on - strand, within BWI76_RS01750 at 357.796 kb on + strand, within BWI76_RS01750 at 357.797 kb on + strand, within BWI76_RS01750 at 357.935 kb on + strand, within BWI76_RS01750 at 358.035 kb on + strand, within BWI76_RS01750 at 358.134 kb on + strand, within BWI76_RS01750 at 358.164 kb on - strand, within BWI76_RS01750 at 358.184 kb on - strand, within BWI76_RS01750 at 358.216 kb on + strand, within BWI76_RS01750 at 358.255 kb on - strand, within BWI76_RS01750 at 358.281 kb on - strand, within BWI76_RS01750 at 358.347 kb on + strand at 358.347 kb on + strand at 358.347 kb on + strand at 358.355 kb on - strand at 358.355 kb on - strand at 358.365 kb on - strand at 358.396 kb on - strand at 358.438 kb on - strand at 358.547 kb on + strand at 358.568 kb on - strand at 358.578 kb on + strand at 358.586 kb on - strand at 358.647 kb on - strand at 358.654 kb on + strand at 358.688 kb on + strand at 358.723 kb on + strand at 358.737 kb on - strand at 358.825 kb on + strand at 358.825 kb on + strand at 358.833 kb on - strand at 358.833 kb on - strand at 358.884 kb on + strand, within BWI76_RS01755 at 358.897 kb on + strand, within BWI76_RS01755 at 358.897 kb on + strand, within BWI76_RS01755 at 358.897 kb on + strand, within BWI76_RS01755 at 358.897 kb on + strand, within BWI76_RS01755 at 358.967 kb on - strand, within BWI76_RS01755 at 358.978 kb on + strand, within BWI76_RS01755 at 359.091 kb on + strand, within BWI76_RS01755 at 359.191 kb on + strand, within BWI76_RS01755 at 359.252 kb on - strand, within BWI76_RS01755
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 356,500 - BWI76_RS01740 0.79 +0.2 356,509 + BWI76_RS01740 0.82 -4.0 356,514 + BWI76_RS01740 0.83 -3.5 356,517 - BWI76_RS01740 0.84 -1.8 356,536 - BWI76_RS01740 0.88 -1.8 356,545 + -2.1 356,545 + -0.8 356,575 - -2.2 356,767 + BWI76_RS01745 0.22 -3.7 356,791 - BWI76_RS01745 0.25 -4.0 356,798 - BWI76_RS01745 0.25 -4.3 356,857 - BWI76_RS01745 0.33 -2.6 356,883 + BWI76_RS01745 0.36 -4.6 356,883 + BWI76_RS01745 0.36 -3.1 356,883 + BWI76_RS01745 0.36 -4.0 356,891 - BWI76_RS01745 0.37 -3.6 356,901 - BWI76_RS01745 0.38 -2.4 356,913 + BWI76_RS01745 0.40 -3.1 356,923 + BWI76_RS01745 0.41 -4.2 356,931 - BWI76_RS01745 0.42 -1.3 356,948 - BWI76_RS01745 0.44 -1.2 356,973 + BWI76_RS01745 0.47 -1.4 356,986 + BWI76_RS01745 0.49 -1.9 356,986 + BWI76_RS01745 0.49 -4.0 356,986 + BWI76_RS01745 0.49 -3.1 356,986 - BWI76_RS01745 0.49 -1.3 356,988 + BWI76_RS01745 0.49 -4.9 356,988 + BWI76_RS01745 0.49 -2.6 356,988 + BWI76_RS01745 0.49 -2.1 356,988 + BWI76_RS01745 0.49 -4.4 356,994 - BWI76_RS01745 0.50 +0.4 356,996 - +0.2 356,996 - BWI76_RS01745 0.50 -3.2 356,996 - BWI76_RS01745 0.50 -3.9 356,996 - BWI76_RS01745 0.50 -4.8 356,996 - BWI76_RS01745 0.50 -2.8 356,996 - BWI76_RS01745 0.50 -2.4 357,019 - BWI76_RS01745 0.53 -0.2 357,032 + BWI76_RS01745 0.55 -0.1 357,072 + BWI76_RS01745 0.60 -2.2 357,073 + BWI76_RS01745 0.60 -2.9 357,080 - BWI76_RS01745 0.61 -1.3 357,104 - BWI76_RS01745 0.64 -0.9 357,104 - BWI76_RS01745 0.64 -1.7 357,127 + BWI76_RS01745 0.66 +1.2 357,127 - BWI76_RS01745 0.66 -1.6 357,132 + BWI76_RS01745 0.67 -2.8 357,135 - BWI76_RS01745 0.67 -1.6 357,137 + BWI76_RS01745 0.68 -3.4 357,139 - BWI76_RS01745 0.68 -1.8 357,140 - BWI76_RS01745 0.68 -2.1 357,145 - BWI76_RS01745 0.69 -1.1 357,148 - BWI76_RS01745 0.69 -2.9 357,153 - +1.8 357,160 - BWI76_RS01745 0.71 +1.2 357,169 - BWI76_RS01745 0.72 -1.1 357,171 - -2.1 357,182 - BWI76_RS01745 0.73 -3.7 357,199 - BWI76_RS01745 0.75 -2.5 357,208 + BWI76_RS01745 0.76 -3.9 357,209 - +0.6 357,222 - BWI76_RS01745 0.78 -0.9 357,235 - BWI76_RS01745 0.80 -4.4 357,245 + BWI76_RS01745 0.81 -3.5 357,245 + BWI76_RS01745 0.81 -1.4 357,258 - BWI76_RS01745 0.83 -2.3 357,292 - BWI76_RS01745 0.87 -2.5 357,313 + BWI76_RS01745 0.90 -3.2 357,313 - BWI76_RS01745 0.90 -1.9 357,321 - -2.8 357,416 + -4.2 357,424 - -2.8 357,434 + -1.8 357,434 + -0.9 357,434 + -3.1 357,434 + -3.9 357,434 + -3.5 357,434 + -3.5 357,434 + -3.5 357,437 - -3.0 357,439 - -2.9 357,442 - -7.0 357,442 - -2.2 357,442 - -2.6 357,442 - -4.2 357,442 - -3.4 357,442 - -4.3 357,474 + -6.3 357,481 + -2.9 357,481 + -1.9 357,481 + -3.2 357,481 + -0.4 357,481 + -4.6 357,481 + -4.7 357,481 + -4.4 357,481 + -4.1 357,481 + -5.3 357,489 - -1.6 357,489 - -4.7 357,489 - -4.5 357,489 - -4.9 357,489 - -6.3 357,489 - -2.2 357,489 - -4.0 357,489 - -4.7 357,489 - -2.6 357,489 - -4.5 357,513 - -2.7 357,513 - -1.8 357,518 - -4.3 357,525 + -4.0 357,527 + -2.9 357,527 + -4.0 357,527 + -2.1 357,533 - -0.8 357,533 - -1.4 357,533 - -4.3 357,534 + -4.9 357,534 + -3.2 357,535 - -3.1 357,535 - -4.3 357,535 - -4.5 357,542 - -2.5 357,551 + -2.4 357,551 + -1.8 357,576 - BWI76_RS01750 0.11 -2.5 357,577 + BWI76_RS01750 0.12 -3.3 357,577 + BWI76_RS01750 0.12 -4.3 357,577 + BWI76_RS01750 0.12 -2.5 357,577 + BWI76_RS01750 0.12 -5.1 357,577 + BWI76_RS01750 0.12 -3.0 357,579 + BWI76_RS01750 0.12 -6.1 357,585 - BWI76_RS01750 0.12 -4.3 357,585 - BWI76_RS01750 0.12 -1.4 357,587 - BWI76_RS01750 0.13 -1.9 357,594 + BWI76_RS01750 0.13 -3.3 357,599 + BWI76_RS01750 0.14 -4.9 357,602 - BWI76_RS01750 0.14 -2.7 357,602 - BWI76_RS01750 0.14 -2.8 357,608 - BWI76_RS01750 0.15 -1.7 357,610 + BWI76_RS01750 0.15 -3.5 357,618 - BWI76_RS01750 0.16 -1.1 357,618 - BWI76_RS01750 0.16 -3.7 357,618 - BWI76_RS01750 0.16 -3.5 357,618 - BWI76_RS01750 0.16 -1.4 357,644 + BWI76_RS01750 0.19 -0.4 357,645 - BWI76_RS01750 0.19 -2.2 357,648 + BWI76_RS01750 0.19 -2.6 357,656 - BWI76_RS01750 0.20 -4.8 357,656 - BWI76_RS01750 0.20 -3.9 357,656 - BWI76_RS01750 0.20 -6.1 357,663 + BWI76_RS01750 0.21 -1.7 357,704 + BWI76_RS01750 0.25 -2.4 357,705 - BWI76_RS01750 0.25 -4.3 357,707 + BWI76_RS01750 0.25 -0.4 357,712 - BWI76_RS01750 0.26 -3.5 357,719 + BWI76_RS01750 0.27 -4.3 357,724 + BWI76_RS01750 0.27 -4.0 357,724 + BWI76_RS01750 0.27 +1.2 357,724 + BWI76_RS01750 0.27 -2.8 357,730 - BWI76_RS01750 0.28 -2.5 357,732 - BWI76_RS01750 0.28 -4.6 357,739 - BWI76_RS01750 0.29 +0.4 357,788 - BWI76_RS01750 0.34 -0.2 357,796 + BWI76_RS01750 0.35 -2.1 357,797 + BWI76_RS01750 0.35 -4.4 357,935 + BWI76_RS01750 0.49 -4.5 358,035 + BWI76_RS01750 0.60 -3.6 358,134 + BWI76_RS01750 0.70 -3.7 358,164 - BWI76_RS01750 0.74 -6.4 358,184 - BWI76_RS01750 0.76 -1.7 358,216 + BWI76_RS01750 0.79 -5.2 358,255 - BWI76_RS01750 0.83 -1.9 358,281 - BWI76_RS01750 0.86 -2.9 358,347 + -5.6 358,347 + -2.1 358,347 + -2.9 358,355 - +1.2 358,355 - -0.8 358,365 - -2.2 358,396 - -3.1 358,438 - -2.1 358,547 + -2.1 358,568 - -4.0 358,578 + -5.4 358,586 - -1.8 358,647 - -3.4 358,654 + -0.7 358,688 + +1.2 358,723 + +0.6 358,737 - +0.5 358,825 + +0.0 358,825 + +0.6 358,833 - +0.3 358,833 - +0.7 358,884 + BWI76_RS01755 0.14 +1.2 358,897 + BWI76_RS01755 0.15 -0.2 358,897 + BWI76_RS01755 0.15 +0.6 358,897 + BWI76_RS01755 0.15 -0.3 358,897 + BWI76_RS01755 0.15 +0.6 358,967 - BWI76_RS01755 0.23 +0.1 358,978 + BWI76_RS01755 0.25 -0.5 359,091 + BWI76_RS01755 0.38 +1.3 359,191 + BWI76_RS01755 0.49 -0.5 359,252 - BWI76_RS01755 0.56 -0.6
Or see this region's nucleotide sequence