Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01130 and BWI76_RS01135 are separated by 11 nucleotides BWI76_RS01135 and BWI76_RS01140 are separated by 240 nucleotides BWI76_RS01140 and BWI76_RS01145 are separated by 102 nucleotides BWI76_RS01145 and BWI76_RS01150 are separated by 55 nucleotides BWI76_RS01150 and BWI76_RS01155 are separated by 22 nucleotides BWI76_RS01155 and BWI76_RS01160 are separated by 45 nucleotides
BWI76_RS01130: BWI76_RS01130 - enterobacterial common antigen polymerase, at 232,899 to 234,245
_RS01130
BWI76_RS01135: BWI76_RS01135 - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 234,257 to 234,997
_RS01135
BWI76_RS01140: BWI76_RS01140 - amino acid permease, at 235,238 to 236,623
_RS01140
BWI76_RS01145: BWI76_RS01145 - tRNA-Arg, at 236,726 to 236,802
_RS01145
BWI76_RS01150: BWI76_RS01150 - tRNA-His, at 236,858 to 236,933
_RS01150
BWI76_RS01155: BWI76_RS01155 - tRNA-Leu, at 236,956 to 237,042
_RS01155
BWI76_RS01160: BWI76_RS01160 - tRNA-Pro, at 237,088 to 237,164
_RS01160
Position (kb) 235
236
237 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 234.278 kb on - strand at 234.297 kb on - strand at 234.607 kb on + strand, within BWI76_RS01135 at 234.644 kb on - strand, within BWI76_RS01135 at 234.795 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.820 kb on + strand, within BWI76_RS01135 at 234.828 kb on - strand, within BWI76_RS01135 at 234.839 kb on + strand, within BWI76_RS01135 at 234.986 kb on + strand at 235.121 kb on + strand at 235.121 kb on + strand at 235.121 kb on + strand at 235.124 kb on - strand at 235.129 kb on - strand at 235.183 kb on - strand at 235.185 kb on + strand at 235.188 kb on - strand at 235.200 kb on - strand at 235.210 kb on - strand at 235.216 kb on - strand at 235.216 kb on - strand at 235.216 kb on - strand at 235.218 kb on + strand at 235.227 kb on - strand at 235.298 kb on + strand at 235.346 kb on + strand at 235.585 kb on + strand, within BWI76_RS01140 at 235.701 kb on + strand, within BWI76_RS01140 at 235.710 kb on - strand, within BWI76_RS01140 at 235.742 kb on - strand, within BWI76_RS01140 at 235.755 kb on + strand, within BWI76_RS01140 at 235.869 kb on + strand, within BWI76_RS01140 at 236.038 kb on - strand, within BWI76_RS01140 at 236.051 kb on + strand, within BWI76_RS01140 at 236.144 kb on + strand, within BWI76_RS01140 at 236.152 kb on - strand, within BWI76_RS01140 at 236.154 kb on - strand, within BWI76_RS01140 at 236.297 kb on - strand, within BWI76_RS01140 at 236.331 kb on - strand, within BWI76_RS01140 at 236.497 kb on + strand at 236.556 kb on - strand at 237.382 kb on - strand at 237.411 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 234,278 - -0.5 234,297 - +1.3 234,607 + BWI76_RS01135 0.47 -0.4 234,644 - BWI76_RS01135 0.52 -2.4 234,795 + BWI76_RS01135 0.73 -3.1 234,820 + BWI76_RS01135 0.76 -0.5 234,820 + BWI76_RS01135 0.76 -1.6 234,820 + BWI76_RS01135 0.76 -1.2 234,828 - BWI76_RS01135 0.77 -1.1 234,839 + BWI76_RS01135 0.79 -0.3 234,986 + +0.3 235,121 + +0.5 235,121 + +0.7 235,121 + -0.5 235,124 - -0.3 235,129 - +1.0 235,183 - +0.9 235,185 + +1.7 235,188 - -0.3 235,200 - +0.1 235,210 - +0.3 235,216 - -0.0 235,216 - -0.7 235,216 - -1.0 235,218 + -0.8 235,227 - -0.1 235,298 + +0.4 235,346 + -0.7 235,585 + BWI76_RS01140 0.25 +0.2 235,701 + BWI76_RS01140 0.33 -1.7 235,710 - BWI76_RS01140 0.34 +0.6 235,742 - BWI76_RS01140 0.36 +0.5 235,755 + BWI76_RS01140 0.37 +0.5 235,869 + BWI76_RS01140 0.46 +0.8 236,038 - BWI76_RS01140 0.58 +1.3 236,051 + BWI76_RS01140 0.59 +0.4 236,144 + BWI76_RS01140 0.65 +1.3 236,152 - BWI76_RS01140 0.66 +1.5 236,154 - BWI76_RS01140 0.66 -0.4 236,297 - BWI76_RS01140 0.76 +0.4 236,331 - BWI76_RS01140 0.79 +0.4 236,497 + +0.0 236,556 - -1.3 237,382 - -0.1 237,411 + -0.4
Or see this region's nucleotide sequence