Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26415

Experiment: Ceftazidime 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.12 mg/ml
5,791,009	-		AO353_26400	0.19	-1.1
5,791,029	+		AO353_26400	0.28	+2.1
5,791,030	-		AO353_26400	0.28	+0.6
5,791,066	+		AO353_26400	0.44	+0.2
5,791,066	+		AO353_26400	0.44	-1.8
5,791,067	-		AO353_26400	0.44	+2.5
5,791,110	-		AO353_26400	0.62	+1.5
5,791,110	-		AO353_26400	0.62	-1.4
5,791,145	+		AO353_26400	0.77	+1.4
5,791,146	-		AO353_26400	0.78	-0.8
5,791,181	+				+0.2
5,791,315	+		AO353_26405	0.52	+0.8
5,791,315	+		AO353_26405	0.52	-0.8
5,791,383	+		AO353_26405	0.81	+2.0
5,791,383	+		AO353_26405	0.81	-0.4
5,791,384	-		AO353_26405	0.81	-1.1
5,791,384	-		AO353_26405	0.81	+0.2
5,791,384	-		AO353_26405	0.81	+2.8
5,791,384	-		AO353_26405	0.81	+2.5
5,791,392	+		AO353_26405	0.85	+0.5
5,791,392	+		AO353_26405	0.85	-1.4
5,791,392	+		AO353_26405	0.85	+0.5
5,791,392	+		AO353_26405	0.85	+0.2
5,791,392	+		AO353_26405	0.85	-1.0
5,791,392	+		AO353_26405	0.85	-0.2
5,791,393	-		AO353_26405	0.85	-1.4
5,791,393	-		AO353_26405	0.85	+0.4
5,791,393	-		AO353_26405	0.85	-1.4
5,791,429	+				+0.9
5,791,429	+				+0.4
5,791,429	+				+0.8
5,791,429	+				-0.5
5,791,429	+				+2.2
5,791,430	-				+0.3
5,791,430	-				+1.5
5,791,472	-		AO353_26410	0.24	+0.2
5,791,472	-		AO353_26410	0.24	+1.2
5,791,472	-		AO353_26410	0.24	+0.2
5,791,472	-		AO353_26410	0.24	-1.2
5,791,500	-		AO353_26410	0.38	+0.6
5,791,500	-				-0.8
5,791,500	-		AO353_26410	0.38	-0.0
5,791,500	-		AO353_26410	0.38	+2.2
5,791,548	-		AO353_26410	0.62	-0.8
5,791,548	-		AO353_26410	0.62	+0.4
5,791,548	-		AO353_26410	0.62	+0.4
5,791,548	-		AO353_26410	0.62	+1.0
5,791,548	-		AO353_26410	0.62	-1.0
5,791,578	+		AO353_26410	0.77	-1.0
5,791,579	-		AO353_26410	0.77	+0.6
5,791,579	-		AO353_26410	0.77	+1.8
5,791,579	-		AO353_26410	0.77	+0.4
5,791,755	-				+0.6
5,791,908	+				+0.3
5,791,909	-				-0.3
5,791,909	-				-1.4
5,791,909	-				-0.4
5,791,912	+				-1.5
5,791,912	+				+2.1
5,791,912	+				-0.8
5,791,912	+				-0.5
5,791,912	+				-0.5
5,791,913	-				-0.6
5,791,913	-				+1.6
5,791,913	-				-0.1
5,791,913	-				-0.8
5,791,913	-				+0.7
5,791,913	-				-0.8
5,791,913	-				-1.6
5,791,913	-				+0.2
5,791,913	-				+0.8
5,791,964	+				-0.2
5,791,965	-				-0.8
5,791,965	-				-0.5
5,791,967	+				-2.4
5,791,968	-				-0.5
5,791,981	+				-1.4
5,791,982	-				+0.2
5,792,026	+				-1.8
5,792,032	+				+1.2
5,792,032	+				+0.8
5,792,033	-				+1.7
5,792,033	-				+2.8
5,792,034	+				-0.8
5,792,034	+				+1.0
5,792,034	+				-0.0
5,792,112	-		AO353_26415	0.11	+2.7
5,792,112	-		AO353_26415	0.11	+0.6
5,792,209	+		AO353_26415	0.19	+0.6
5,792,235	-		AO353_26415	0.22	-1.1
5,792,278	+		AO353_26415	0.26	-0.2
5,792,344	+		AO353_26415	0.32	+0.2
5,792,345	-		AO353_26415	0.32	-2.4
5,792,447	-		AO353_26415	0.41	+1.0
5,792,460	-		AO353_26415	0.43	+0.0
5,792,460	-				+0.2
5,792,534	+		AO353_26415	0.49	-1.0
5,792,535	-		AO353_26415	0.49	-2.9
5,792,831	+		AO353_26415	0.77	-0.8
5,792,938	-		AO353_26415	0.86	+0.4
5,792,938	-		AO353_26415	0.86	+1.2
5,793,021	+				+0.5
5,793,022	-				+0.9
5,793,083	+				+0.2
5,793,083	+				-0.8
5,793,083	+				-1.4
5,793,083	+				+0.2
5,793,083	+				-0.7
5,793,083	+				-0.7
5,793,083	+				-0.1
5,793,083	+				-1.8
5,793,083	+				-0.6
5,793,083	+				+0.2
5,793,083	+				+0.5
5,793,083	+				+0.6
5,793,083	+				+0.9
5,793,084	-				+0.4
5,793,084	-				-0.0
5,793,084	-				-0.8
5,793,084	-				-0.9
5,793,084	-				+0.2
5,793,084	-				-0.8
5,793,084	-				-1.1
5,793,084	-				+1.7
5,793,181	+				-0.5
5,793,181	+				+0.5
5,793,181	+				-0.4
5,793,181	+				-0.6
5,793,181	+				+0.2
5,793,181	+				-0.7
5,793,332	+		AO353_26420	0.19	+1.4
5,793,332	+		AO353_26420	0.19	-0.5
5,793,333	-		AO353_26420	0.20	+1.2
5,793,333	-		AO353_26420	0.20	-1.0
5,793,409	+		AO353_26420	0.27	-1.1
5,793,409	+		AO353_26420	0.27	+0.5
5,793,409	+		AO353_26420	0.27	-0.4
5,793,409	+		AO353_26420	0.27	+0.6
5,793,409	+		AO353_26420	0.27	-0.9
5,793,409	+		AO353_26420	0.27	-1.2
5,793,410	-		AO353_26420	0.27	+1.8
5,793,410	-		AO353_26420	0.27	+0.6
5,793,410	-		AO353_26420	0.27	+0.7
5,793,410	-				+0.8
5,793,435	-		AO353_26420	0.30	+1.8
5,793,525	+		AO353_26420	0.39	-1.8
5,793,526	-		AO353_26420	0.39	+0.8
5,793,696	+		AO353_26420	0.56	+0.7
5,793,696	+		AO353_26420	0.56	-0.1
5,793,697	-		AO353_26420	0.56	+0.2
5,793,697	-		AO353_26420	0.56	-1.2
5,793,697	-		AO353_26420	0.56	-0.1
5,793,697	-		AO353_26420	0.56	-1.6
5,793,697	-		AO353_26420	0.56	-1.4
5,793,734	-		AO353_26420	0.60	+0.2
5,793,790	+		AO353_26420	0.66	+0.1
5,793,790	+		AO353_26420	0.66	+1.2
5,793,790	+		AO353_26420	0.66	-1.6
5,793,791	-		AO353_26420	0.66	+2.2
5,793,792	+		AO353_26420	0.66	-0.4
5,793,793	-		AO353_26420	0.66	-2.4
5,793,846	+		AO353_26420	0.71	+2.2
5,793,846	+		AO353_26420	0.71	-1.6
5,793,846	+		AO353_26420	0.71	+1.5
5,793,846	+		AO353_26420	0.71	-0.0
5,793,846	+		AO353_26420	0.71	+0.2
5,793,847	-		AO353_26420	0.72	+0.8
5,793,847	-		AO353_26420	0.72	-0.2
5,793,874	-		AO353_26420	0.74	+1.1
5,793,971	-		AO353_26420	0.84	-1.4
5,793,971	-		AO353_26420	0.84	+1.0
5,794,000	-		AO353_26420	0.87	+1.8
5,794,075	-				+2.2