Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08015

Experiment: Ceftazidime 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.12 mg/ml
1,766,950	+				-0.2
1,766,951	-				-0.6
1,766,987	+				-0.2
1,766,987	+				-1.1
1,766,987	+				-1.7
1,766,987	+				+0.6
1,766,987	+				+0.4
1,766,987	+				+0.2
1,766,987	+				-0.5
1,766,987	+				-0.4
1,766,988	-				-0.1
1,766,988	-				-0.1
1,766,988	-				+0.1
1,766,988	-				-0.4
1,766,988	-				-0.7
1,766,988	-				-0.1
1,766,988	-				+0.8
1,766,988	-				+1.2
1,766,988	-				+0.5
1,766,988	-				-1.8
1,766,991	+				+0.2
1,766,991	+				-0.6
1,766,992	-				-0.8
1,766,992	-				+0.2
1,766,992	-				-0.0
1,766,992	-				-1.7
1,766,992	-				-1.4
1,767,004	+				+1.6
1,767,005	-				-0.6
1,767,005	-				-0.5
1,767,009	+				+0.2
1,767,009	+				+1.6
1,767,009	+				-0.2
1,767,010	-				-0.3
1,767,010	-				-0.8
1,767,092	+				-0.8
1,767,092	+				+1.2
1,767,092	+				+1.0
1,767,093	-				-1.3
1,767,093	-				-0.6
1,767,093	-				+0.9
1,767,093	-				+1.8
1,767,111	-				-1.1
1,767,119	+				-0.6
1,767,119	+				-0.2
1,767,119	+				-0.6
1,767,120	-				+2.2
1,767,120	-				+0.0
1,767,136	-				+0.9
1,767,141	+				-2.0
1,767,141	+				+1.8
1,767,141	+				+0.6
1,767,141	+				+0.1
1,767,141	+				+0.8
1,767,141	+				-0.1
1,767,141	+				+0.5
1,767,141	+				-1.4
1,767,142	-				-0.8
1,767,142	-				-0.2
1,767,142	-				-0.4
1,767,142	-				+1.6
1,767,238	+		AO353_08015	0.11	-0.8
1,767,238	+		AO353_08015	0.11	-0.2
1,767,238	+		AO353_08015	0.11	+0.2
1,767,238	+		AO353_08015	0.11	+1.7
1,767,239	-		AO353_08015	0.11	-0.8
1,767,239	-		AO353_08015	0.11	-0.7
1,767,239	-		AO353_08015	0.11	+0.2
1,767,239	-		AO353_08015	0.11	+0.2
1,767,239	-		AO353_08015	0.11	-1.1
1,767,265	+		AO353_08015	0.15	-1.2
1,767,265	+		AO353_08015	0.15	+2.7
1,767,265	+		AO353_08015	0.15	-0.4
1,767,265	+		AO353_08015	0.15	-1.1
1,767,266	-		AO353_08015	0.15	-0.4
1,767,403	+		AO353_08015	0.31	+0.3
1,767,403	+		AO353_08015	0.31	-1.6
1,767,403	+		AO353_08015	0.31	+0.2
1,767,403	+		AO353_08015	0.31	-1.8
1,767,404	-		AO353_08015	0.31	-0.1
1,767,404	-		AO353_08015	0.31	-1.6
1,767,404	-		AO353_08015	0.31	+0.3
1,767,404	-		AO353_08015	0.31	+1.2
1,767,652	+		AO353_08015	0.60	-1.7
1,767,653	-		AO353_08015	0.60	-1.8
1,767,673	+		AO353_08015	0.63	-1.2
1,767,673	+		AO353_08015	0.63	-1.1
1,767,674	-		AO353_08015	0.63	-2.0
1,767,674	-		AO353_08015	0.63	-0.1
1,767,674	-		AO353_08015	0.63	+0.2
1,767,674	-		AO353_08015	0.63	+1.2
1,767,674	-		AO353_08015	0.63	+0.1
1,767,674	-		AO353_08015	0.63	-1.1
1,767,674	-		AO353_08015	0.63	-1.8
1,767,674	-		AO353_08015	0.63	-1.0
1,767,674	-		AO353_08015	0.63	-0.4
1,767,674	-		AO353_08015	0.63	+0.9
1,767,680	-		AO353_08015	0.64	-1.3
1,767,695	+		AO353_08015	0.65	-1.3
1,767,696	-		AO353_08015	0.65	-1.2
1,767,696	-		AO353_08015	0.65	+0.5
1,767,751	+		AO353_08015	0.72	+0.2
1,767,752	-		AO353_08015	0.72	-1.1
1,767,752	-		AO353_08015	0.72	+1.2
1,767,752	-		AO353_08015	0.72	-0.8
1,767,826	+		AO353_08015	0.81	-0.2
1,767,925	+				+0.2
1,767,925	+				-1.4
1,767,925	+				-1.4
1,767,925	+				+1.6
1,767,996	+				+0.2
1,767,996	+				+1.2
1,767,997	-				+0.1
1,767,997	-				+0.9
1,767,997	-				+0.1
1,767,997	-				-0.4
1,767,997	-				-1.0
1,768,072	+				-0.2
1,768,072	+				+0.5
1,768,072	+				-1.8
1,768,072	+				-1.1
1,768,072	+				+0.3
1,768,072	+				-0.8
1,768,072	+				+1.6
1,768,072	+				+0.0
1,768,072	+				+1.5
1,768,072	+				-0.3
1,768,072	+				-0.7
1,768,072	+				-0.7
1,768,072	+				-0.8
1,768,072	+				+0.3
1,768,073	-				+1.0
1,768,073	-				+0.3
1,768,073	-				-1.0
1,768,073	-				-1.4
1,768,073	-				-0.4
1,768,073	-				-0.6
1,768,086	+				-0.5
1,768,086	+				-0.8
1,768,086	+				-1.1
1,768,086	+				+1.1
1,768,087	-				-1.5
1,768,087	-				+0.2
1,768,114	+				+1.4
1,768,114	+				-0.3
1,768,115	-				+0.2
1,768,115	-				+0.0
1,768,115	-				+1.6
1,768,115	-				+0.7
1,768,115	-				-0.7
1,768,115	-				-0.1
1,768,115	-				-0.8
1,768,123	+				-0.5
1,768,123	+				+0.6
1,768,123	+				-0.4
1,768,123	+				+0.2
1,768,124	-				+1.7
1,768,124	-				-0.5
1,768,138	+				+0.2
1,768,138	+				+0.4
1,768,138	+				+0.2
1,768,139	-				+1.1
1,768,139	-				-0.9
1,768,139	-				-1.7
1,768,139	-				-0.7
1,768,139	-				-1.1
1,768,316	-		AO353_08020	0.22	-0.6
1,768,392	+		AO353_08020	0.29	+2.2
1,768,392	+		AO353_08020	0.29	+1.2
1,768,393	-		AO353_08020	0.29	+0.8
1,768,393	-		AO353_08020	0.29	+1.1
1,768,393	-		AO353_08020	0.29	-0.4
1,768,393	-		AO353_08020	0.29	-0.8
1,768,475	-		AO353_08020	0.37	-1.4
1,768,520	+		AO353_08020	0.41	-0.4
1,768,520	+		AO353_08020	0.41	-0.1
1,768,520	+		AO353_08020	0.41	-0.8
1,768,520	+		AO353_08020	0.41	+2.5
1,768,520	+		AO353_08020	0.41	-0.9
1,768,520	+		AO353_08020	0.41	-2.0
1,768,521	-		AO353_08020	0.41	+0.2
1,768,521	-		AO353_08020	0.41	-0.5
1,768,660	+		AO353_08020	0.54	-0.6
1,768,660	+		AO353_08020	0.54	-1.0
1,768,660	+		AO353_08020	0.54	-0.3
1,768,660	+		AO353_08020	0.54	+1.0
1,768,661	-		AO353_08020	0.54	+0.2
1,768,661	-		AO353_08020	0.54	-0.4
1,768,661	-		AO353_08020	0.54	+3.2
1,768,661	-		AO353_08020	0.54	-0.9
1,768,661	-		AO353_08020	0.54	-2.4
1,768,661	-		AO353_08020	0.54	+0.7
1,768,661	-		AO353_08020	0.54	-0.6
1,768,663	-		AO353_08020	0.54	-0.4
1,768,663	-		AO353_08020	0.54	+1.4
1,768,663	-		AO353_08020	0.54	-2.1
1,768,663	-		AO353_08020	0.54	-1.5
1,768,741	+		AO353_08020	0.61	-0.0
1,768,741	+		AO353_08020	0.61	-0.4
1,768,741	+		AO353_08020	0.61	-0.7
1,768,741	+		AO353_08020	0.61	+0.3
1,768,742	-		AO353_08020	0.62	+0.8
1,768,890	+		AO353_08020	0.75	+0.2
1,768,890	+		AO353_08020	0.75	-1.7
1,768,948	+		AO353_08020	0.81	-0.4
1,768,949	-		AO353_08020	0.81	-0.8
1,768,949	-		AO353_08020	0.81	-0.8