Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06555

Experiment: Ceftazidime 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.12 mg/ml
1,456,730	-		AO353_06550	0.61	+0.0
1,456,772	-		AO353_06550	0.64	-0.7
1,456,772	-		AO353_06550	0.64	-0.6
1,456,772	-		AO353_06550	0.64	-3.1
1,456,994	-		AO353_06550	0.81	-2.6
1,456,994	-		AO353_06550	0.81	-0.6
1,456,994	-		AO353_06550	0.81	-1.2
1,456,994	-		AO353_06550	0.81	-1.3
1,456,994	-		AO353_06550	0.81	+0.0
1,457,013	+		AO353_06550	0.82	+0.3
1,457,014	-		AO353_06550	0.82	-1.3
1,457,014	-		AO353_06550	0.82	+0.7
1,457,014	-		AO353_06550	0.82	-3.0
1,457,014	-		AO353_06550	0.82	-2.1
1,457,014	-		AO353_06550	0.82	-3.2
1,457,014	-		AO353_06550	0.82	-2.0
1,457,014	-		AO353_06550	0.82	+0.0
1,457,014	-		AO353_06550	0.82	-2.2
1,457,014	-		AO353_06550	0.82	-0.5
1,457,018	-		AO353_06550	0.82	-1.7
1,457,018	-		AO353_06550	0.82	+0.0
1,457,018	-		AO353_06550	0.82	-1.0
1,457,018	-		AO353_06550	0.82	-0.1
1,457,099	-		AO353_06550	0.88	-1.8
1,457,099	-		AO353_06550	0.88	-1.2
1,457,099	-		AO353_06550	0.88	-1.8
1,457,099	-		AO353_06550	0.88	+0.6
1,457,099	-		AO353_06550	0.88	-0.6
1,457,235	-				-1.3
1,457,235	-				-1.0
1,457,244	-				-1.0
1,457,244	-				-0.3
1,457,244	-				-3.0
1,457,244	-				-0.6
1,457,256	-				-0.2
1,457,256	-				-1.0
1,457,256	-				-1.1
1,457,256	-				+0.0
1,457,256	-				-3.1
1,457,267	+				-1.1
1,457,268	-				-0.6
1,457,268	-				+0.2
1,457,291	-				-2.0
1,457,291	-				-0.2
1,457,291	-				+0.2
1,457,314	+				-0.7
1,457,314	+				-1.0
1,457,369	-				+0.7
1,457,369	-				+0.0
1,457,470	+				+1.0
1,457,493	+				-0.6
1,457,493	+				+0.0
1,457,493	+				-0.3
1,457,494	-				+0.2
1,457,494	-				+1.0
1,457,494	-				-0.3
1,457,494	-				-1.0
1,457,494	-				+0.4
1,457,494	-				+2.1
1,457,494	-				-0.2
1,457,495	+				+2.0
1,457,495	+				-0.5
1,457,496	-				+1.6
1,457,533	-				+0.1
1,457,603	+				+0.5
1,457,658	+		AO353_06555	0.10	+0.9
1,457,759	+		AO353_06555	0.16	+0.0
1,457,760	-		AO353_06555	0.16	-0.7
1,457,760	-		AO353_06555	0.16	+0.1
1,457,760	-		AO353_06555	0.16	-0.1
1,457,906	+		AO353_06555	0.23	-1.4
1,457,906	+		AO353_06555	0.23	-0.8
1,457,906	+		AO353_06555	0.23	-0.7
1,457,907	-		AO353_06555	0.23	+1.0
1,457,907	-		AO353_06555	0.23	-0.4
1,457,907	-		AO353_06555	0.23	+0.6
1,457,907	-		AO353_06555	0.23	+1.0
1,457,907	-		AO353_06555	0.23	-0.0
1,457,907	-		AO353_06555	0.23	-1.0
1,457,907	-		AO353_06555	0.23	+0.2
1,458,037	+		AO353_06555	0.30	+0.7
1,458,037	+		AO353_06555	0.30	+0.0
1,458,037	+		AO353_06555	0.30	+1.4
1,458,037	+		AO353_06555	0.30	-0.1
1,458,037	+		AO353_06555	0.30	-0.5
1,458,037	+		AO353_06555	0.30	+0.6
1,458,037	+		AO353_06555	0.30	+0.4
1,458,038	-		AO353_06555	0.30	-0.0
1,458,038	-		AO353_06555	0.30	+0.0
1,458,040	+		AO353_06555	0.30	+0.0
1,458,040	+		AO353_06555	0.30	-1.2
1,458,041	-		AO353_06555	0.30	+0.8
1,458,041	-		AO353_06555	0.30	-0.8
1,458,041	-		AO353_06555	0.30	-0.9
1,458,041	-		AO353_06555	0.30	+0.5
1,458,041	-		AO353_06555	0.30	+0.5
1,458,279	+		AO353_06555	0.43	+0.3
1,458,280	-		AO353_06555	0.43	-2.1
1,458,280	-		AO353_06555	0.43	-0.5
1,458,280	-		AO353_06555	0.43	+1.0
1,458,381	+		AO353_06555	0.48	+1.5
1,458,381	+		AO353_06555	0.48	-1.5
1,458,381	+		AO353_06555	0.48	+0.0
1,458,381	+		AO353_06555	0.48	-1.5
1,458,381	+		AO353_06555	0.48	-0.9
1,458,387	+		AO353_06555	0.48	-0.1
1,458,436	+		AO353_06555	0.51	-3.0
1,458,437	-		AO353_06555	0.51	+0.3
1,458,437	-		AO353_06555	0.51	-0.6
1,458,437	-		AO353_06555	0.51	+0.4
1,458,597	+		AO353_06555	0.59	+0.9
1,458,597	+		AO353_06555	0.59	+0.8
1,458,637	+		AO353_06555	0.61	+0.3
1,458,637	+		AO353_06555	0.61	+0.8
1,458,638	-		AO353_06555	0.61	-1.2
1,458,638	-		AO353_06555	0.61	-0.1
1,458,734	+		AO353_06555	0.66	-0.4
1,458,734	+		AO353_06555	0.66	+0.0
1,458,735	-		AO353_06555	0.66	+1.1
1,458,735	-		AO353_06555	0.66	-1.0
1,458,735	-		AO353_06555	0.66	+0.5
1,458,746	+		AO353_06555	0.67	-0.5
1,458,746	+		AO353_06555	0.67	-1.0
1,458,746	+		AO353_06555	0.67	-0.2
1,458,746	+		AO353_06555	0.67	-0.5
1,458,746	+		AO353_06555	0.67	-0.4
1,458,746	+		AO353_06555	0.67	+0.0
1,458,746	+		AO353_06555	0.67	-0.4
1,458,746	+		AO353_06555	0.67	+1.0
1,458,746	+		AO353_06555	0.67	-0.1
1,458,747	-		AO353_06555	0.67	+1.1
1,458,747	-		AO353_06555	0.67	-0.3
1,458,903	+		AO353_06555	0.75	-0.2
1,458,903	+		AO353_06555	0.75	+1.0
1,458,903	+		AO353_06555	0.75	+1.0
1,458,903	+		AO353_06555	0.75	+0.3
1,458,903	+		AO353_06555	0.75	-1.3
1,458,903	+		AO353_06555	0.75	+0.0
1,458,903	+		AO353_06555	0.75	-0.5
1,458,903	+		AO353_06555	0.75	+1.0
1,458,904	-		AO353_06555	0.75	+0.8
1,458,904	-		AO353_06555	0.75	+0.7
1,458,904	-		AO353_06555	0.75	+0.9
1,458,982	-		AO353_06555	0.79	-0.3
1,458,982	-		AO353_06555	0.79	-1.3
1,458,982	-		AO353_06555	0.79	-0.5
1,459,250	+				-0.7
1,459,251	-				+1.3
1,459,251	-				+0.0
1,459,251	-				+0.0
1,459,251	-				-0.6
1,459,383	-				-1.5
1,459,385	+				+0.6
1,459,386	-				-1.0
1,459,386	-				+1.0
1,459,386	-				+0.0
1,459,386	-				-0.3
1,459,515	-				+0.9
1,459,515	-				+1.5
1,459,536	-				-0.4
1,459,558	+				+0.0
1,459,558	+				-0.2
1,459,583	+				-2.0
1,459,596	+				-1.5
1,459,596	+				+2.4
1,459,597	-				-2.1
1,459,632	+				+0.3
1,459,632	+				+0.0
1,459,633	-				-0.3
1,459,650	-				+1.0
1,459,666	+				+0.8
1,459,666	+				+0.2
1,459,666	+				+0.4
1,459,666	+				-3.0
1,459,666	+				-1.8
1,459,667	-				+1.5
1,459,667	-				+0.8
1,459,667	-				+0.5
1,459,667	-				+0.2
1,459,667	-				+0.3
1,459,667	-				-1.3
1,459,668	+				-0.3
1,459,668	+				-0.5
1,459,668	+				+0.0
1,459,668	+				+0.8
1,459,668	+				-2.0
1,459,668	+				-0.0
1,459,668	+				-1.7
1,459,669	-				+1.0
1,459,669	-				-0.4
1,459,669	-				+0.7
1,459,669	-				+0.4
1,459,669	-				+0.7
1,459,669	-				+1.0
1,459,669	-				+0.4
1,459,669	-				-1.1
1,459,669	-				-0.0
1,459,669	-				-0.1
1,459,689	+				-0.5
1,459,689	+				-2.0
1,459,689	+				+1.5
1,459,690	-				-0.7
1,459,690	-				-0.7
1,459,690	-				+0.5
1,459,690	-				+0.5
1,459,690	-				-0.5
1,459,704	-				-0.5
1,459,717	+				-1.5
1,459,717	+				+1.8
1,459,717	+				-0.7
1,459,717	+				+0.2
1,459,718	-				-1.2
1,459,718	-				-0.5
1,459,747	+				+0.0
1,459,747	+				-0.0
1,459,747	+				-1.3
1,459,748	-				-0.8
1,459,748	-				+1.0
1,459,748	-				+0.7
1,459,748	-				+0.8
1,459,748	-				+0.0
1,459,748	-				+0.2
1,459,748	-				-1.3
1,459,748	-				-0.5
1,459,751	+				+0.6
1,459,751	+				+0.0
1,459,751	+				+0.3
1,459,751	+				-1.8
1,459,752	-				+1.0
1,459,760	+				-0.2
1,459,760	+				+0.2
1,459,760	+				-0.4
1,459,760	+				+0.3
1,459,760	+				+0.6
1,459,760	+				+1.6
1,459,760	+				+0.2
1,459,760	+				-0.3
1,459,760	+				+0.4
1,459,760	+				-0.2
1,459,760	+				+1.9
1,459,760	+				-0.1
1,459,760	+				-1.3
1,459,761	-				-0.3
1,459,761	-				-2.0
1,459,761	-				+0.7
1,459,761	-				-0.0
1,459,761	-				+0.3
1,459,761	-				+1.4
1,459,761	-				-0.8
1,459,761	-				-0.6
1,459,761	-				-0.1
1,459,799	+				+1.5
1,459,799	+				+0.0
1,459,799	+				-0.5
1,459,799	+				-0.3
1,459,799	+				+2.3
1,459,800	-				+1.0
1,459,800	-				+1.0
1,459,800	-				+0.7
1,459,800	-				-0.4
1,459,810	+				+0.6
1,459,810	+				+1.2
1,459,810	+				-0.5
1,459,810	+				+0.4
1,459,810	+				-1.0
1,459,810	+				+1.0
1,459,811	-				+0.9
1,459,811	-				+1.6
1,459,811	-				+0.8
1,459,811	-				-0.5
1,459,811	-				-0.0
1,459,811	-				-0.8
1,459,811	-				-1.8
1,459,811	-				+0.2
1,459,947	+		AO353_06560	0.16	-0.3
1,460,076	-		AO353_06560	0.25	+2.0
1,460,141	+		AO353_06560	0.29	+0.0
1,460,141	+		AO353_06560	0.29	+0.0
1,460,141	+		AO353_06560	0.29	+0.3
1,460,141	+		AO353_06560	0.29	+2.4
1,460,142	-		AO353_06560	0.29	+1.7
1,460,142	-		AO353_06560	0.29	+1.0
1,460,142	-		AO353_06560	0.29	-2.0